nsv4375909
- Organism: Homo sapiens
- Study:nstd173 (Zarrei et al. 2019)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:36,749
- Publication(s):Zarrei et al. 2019
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 488 SVs from 56 studies. See in: genome view
Overlapping variant regions from other studies: 488 SVs from 56 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4375909 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000008.11 | Chr8 | 15,840,590 | 15,877,338 |
| nsv4375909 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000008.10 | Chr8 | 15,698,099 | 15,734,847 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv15672409 | copy number loss | 9-0004-001 | SNP array | Genotyping | 25 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv15672409 | Remapped | Perfect | NC_000008.11:g.(?_ 15840590)_(1587733 8_?)del | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 15,840,590 | 15,877,338 |
| nssv15672409 | Submitted genomic | NC_000008.10:g.(?_ 15698099)_(1573484 7_?)del | GRCh37 (hg19) | NC_000008.10 | Chr8 | 15,698,099 | 15,734,847 |