nsv4375939
- Organism: Homo sapiens
- Study:nstd173 (Zarrei et al. 2019)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:70,983
- Publication(s):Zarrei et al. 2019
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 463 SVs from 46 studies. See in: genome view
Overlapping variant regions from other studies: 463 SVs from 46 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4375939 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000021.9 | Chr21 | 25,808,880 | 25,879,862 |
| nsv4375939 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000021.8 | Chr21 | 27,181,191 | 27,252,173 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv15667645 | copy number loss | 5-1000-003 | SNP array | Genotyping | 18 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv15667645 | Remapped | Perfect | NC_000021.9:g.(?_2 5808880)_(25879862 _?)del | GRCh38.p12 | First Pass | NC_000021.9 | Chr21 | 25,808,880 | 25,879,862 |
| nssv15667645 | Submitted genomic | NC_000021.8:g.(?_2 7181191)_(27252173 _?)del | GRCh37 (hg19) | NC_000021.8 | Chr21 | 27,181,191 | 27,252,173 |