nsv4376153
- Organism: Homo sapiens
- Study:nstd173 (Zarrei et al. 2019)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:290,609
- Publication(s):Zarrei et al. 2019
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1183 SVs from 83 studies. See in: genome view
Overlapping variant regions from other studies: 1183 SVs from 83 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
nsv4376153 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000010.11 | Chr10 | 54,059,711 | 54,350,319 |
nsv4376153 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000010.10 | Chr10 | 55,819,471 | 56,110,079 |
Variant Call Information
Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
---|---|---|---|---|---|
nssv15667008 | copy number loss | 7-0148-003 | SNP array | Genotyping | 22 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
nssv15667008 | Remapped | Perfect | NC_000010.11:g.(?_ 54059711)_(5435031 9_?)del | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 54,059,711 | 54,350,319 |
nssv15667008 | Submitted genomic | NC_000010.10:g.(?_ 55819471)_(5611007 9_?)del | GRCh37 (hg19) | NC_000010.10 | Chr10 | 55,819,471 | 56,110,079 |