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dbVar

Database of genomic structural variation

nsv437708

Organism: Homo sapiens

Study:nstd17 (Conrad et al. 2005)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:NCBI34 (hg16)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:61,011

Publication(s):Conrad et al. 2005

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 462 SVs from 81 studies. See in: genome view

Remapped(Score: Perfect):25,548,302-25,609,312

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nsv437708	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000011.10	Chr11	25,548,302	25,600,289	25,602,598	25,609,312
nsv437708	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000011.9	Chr11	25,569,848	25,621,835	25,624,144	25,630,858
nsv437708	Submitted genomic		NCBI34 (hg16)	Primary Assembly		NC_000011.7	Chr11	25,534,157	25,586,144	25,588,453	25,595,167

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Zygosity	Other Calls in this Sample and Study
nssv467589	copy number loss	NA19139	SNP array	SNP genotyping analysis	Heterozygous	25

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nssv467589	Remapped	Perfect	NC_000011.10:g.(25 548302_25600289)_( 25602598_25609312) del	GRCh38.p12	First Pass	NC_000011.10	Chr11	25,548,302	25,600,289	25,602,598	25,609,312
nssv467589	Remapped	Perfect	NC_000011.9:g.(255 69848_25621835)_(2 5624144_25630858)d el	GRCh37.p13	First Pass	NC_000011.9	Chr11	25,569,848	25,621,835	25,624,144	25,630,858
nssv467589	Submitted genomic		NC_000011.7:g.(255 34157_25586144)_(2 5588453_25595167)d el	NCBI34 (hg16)		NC_000011.7	Chr11	25,534,157	25,586,144	25,588,453	25,595,167

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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