nsv437724
- Organism: Homo sapiens
- Study:nstd17 (Conrad et al. 2005)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI34 (hg16)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:94,811
- Publication(s):Conrad et al. 2005
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 525 SVs from 70 studies. See in: genome view
Overlapping variant regions from other studies: 484 SVs from 68 studies. See in: genome view
Overlapping variant regions from other studies: 237 SVs from 37 studies. See in: genome view
Overlapping variant regions from other studies: 1 SVs from 1 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nsv437724 | Remapped | Good | GRCh38.p12 | Primary Assembly | First Pass | NC_000003.12 | Chr3 | 60,837,351 | 60,837,351 | 60,932,161 | 60,932,161 |
| nsv437724 | Remapped | Pass | GRCh37.p13 | Primary Assembly | Second Pass | NC_000003.11 | Chr3 | - | 60,830,770 | 60,917,833 | 60,917,833 |
| nsv437724 | Remapped | Pass | GRCh37.p13 | PATCHES | First Pass | NW_003871058.1 | Chr3|NW_00 3871058.1 | - | 272,500 | 359,563 | 359,563 |
| nsv437724 | Submitted genomic | NCBI34 (hg16) | Primary Assembly | NC_000003.8 | Chr3 | 60,780,350 | 60,783,767 | 60,860,449 | 60,875,171 |
Variant Call Information
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nssv467605 | Remapped | Good | NC_000003.12:g.(60 837351_60837351)_( 60932161_60932161) del | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 60,837,351 | 60,837,351 | 60,932,161 | 60,932,161 |
| nssv467605 | Remapped | Pass | NW_003871058.1:g.( ?_272500)_(359563_ 359563)del | GRCh37.p13 | First Pass | NW_003871058.1 | Chr3|NW_00 3871058.1 | - | 272,500 | 359,563 | 359,563 |
| nssv467605 | Remapped | Pass | NC_000003.11:g.(?_ 60830770)_(6091783 3_60917833)del | GRCh37.p13 | Second Pass | NC_000003.11 | Chr3 | - | 60,830,770 | 60,917,833 | 60,917,833 |
| nssv467605 | Submitted genomic | NC_000003.8:g.(607 80350_60783767)_(6 0860449_60875171)d el | NCBI34 (hg16) | NC_000003.8 | Chr3 | 60,780,350 | 60,783,767 | 60,860,449 | 60,875,171 |