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dbVar

Database of genomic structural variation

nsv4377594

Organism: Homo sapiens

Study:nstd173 (Zarrei et al. 2019)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:157,975

Publication(s):Zarrei et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 733 SVs from 69 studies. See in: genome view

Remapped(Score: Perfect):118,582,026-118,740,000

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv4377594	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000006.12	Chr6	118,582,026	118,740,000
nsv4377594	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000006.11	Chr6	118,903,189	119,061,163

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv15627058	copy number gain	1-0479-001	SNP array	Genotyping	25
nssv15627250	copy number gain	1-0479-007	SNP array	Genotyping	21

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15627058	Remapped	Perfect	NC_000006.12:g.(?_ 118582026)_(118740 000_?)dup	GRCh38.p12	First Pass	NC_000006.12	Chr6	118,582,026	118,740,000
nssv15627250	Remapped	Perfect	NC_000006.12:g.(?_ 118582026)_(118740 000_?)dup	GRCh38.p12	First Pass	NC_000006.12	Chr6	118,582,026	118,740,000
nssv15627058	Submitted genomic		NC_000006.11:g.(?_ 118903189)_(119061 163_?)dup	GRCh37 (hg19)		NC_000006.11	Chr6	118,903,189	119,061,163
nssv15627250	Submitted genomic		NC_000006.11:g.(?_ 118903189)_(119061 163_?)dup	GRCh37 (hg19)		NC_000006.11	Chr6	118,903,189	119,061,163

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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