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dbVar

Database of genomic structural variation

nsv4377964

Organism: Homo sapiens

Study:nstd173 (Zarrei et al. 2019)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:28,565

Publication(s):Zarrei et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 381 SVs from 67 studies. See in: genome view

Remapped(Score: Perfect):35,357,402-35,385,966

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv4377964	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000002.12	Chr2	35,357,402	35,385,966
nsv4377964	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000002.11	Chr2	35,582,468	35,611,032

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv15641848	copy number loss	14-0277-002	SNP array	Genotyping	19
nssv15678212	copy number loss	184235	SNP array	Genotyping	24

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15641848	Remapped	Perfect	NC_000002.12:g.(?_ 35357402)_(3538596 6_?)del	GRCh38.p12	First Pass	NC_000002.12	Chr2	35,357,402	35,385,966
nssv15678212	Remapped	Perfect	NC_000002.12:g.(?_ 35357402)_(3538596 6_?)del	GRCh38.p12	First Pass	NC_000002.12	Chr2	35,357,402	35,385,966
nssv15641848	Submitted genomic		NC_000002.11:g.(?_ 35582468)_(3561103 2_?)del	GRCh37 (hg19)		NC_000002.11	Chr2	35,582,468	35,611,032
nssv15678212	Submitted genomic		NC_000002.11:g.(?_ 35582468)_(3561103 2_?)del	GRCh37 (hg19)		NC_000002.11	Chr2	35,582,468	35,611,032

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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