nsv4379036
- Organism: Homo sapiens
- Study:nstd173 (Zarrei et al. 2019)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:26,048
- Publication(s):Zarrei et al. 2019
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 212 SVs from 49 studies. See in: genome view
Overlapping variant regions from other studies: 212 SVs from 49 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4379036 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000001.11 | Chr1 | 45,160,510 | 45,186,557 |
| nsv4379036 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000001.10 | Chr1 | 45,626,182 | 45,652,229 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv15648222 | copy number loss | 2-1235-004 | SNP array | Genotyping | 19 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv15648222 | Remapped | Perfect | NC_000001.11:g.(?_ 45160510)_(4518655 7_?)del | GRCh38.p12 | First Pass | NC_000001.11 | Chr1 | 45,160,510 | 45,186,557 |
| nssv15648222 | Submitted genomic | NC_000001.10:g.(?_ 45626182)_(4565222 9_?)del | GRCh37 (hg19) | NC_000001.10 | Chr1 | 45,626,182 | 45,652,229 |