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dbVar

Database of genomic structural variation

nsv4379129

Organism: Homo sapiens

Study:nstd173 (Zarrei et al. 2019)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:5
Validation:Not tested
Clinical Assertions: No
Region Size:184,705

Publication(s):Zarrei et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 1368 SVs from 95 studies. See in: genome view

Remapped(Score: Perfect):136,665,653-136,850,357

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv4379129	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000008.11	Chr8	136,665,653	136,850,357
nsv4379129	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000008.10	Chr8	137,677,896	137,862,600

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv15611568	copy number loss	1-0098-003	SNP array	Genotyping	27
nssv15616815	copy number loss	1-0807-003	SNP array	Genotyping	22
nssv15648219	copy number loss	2-1235-003	SNP array	Genotyping	16
nssv15664902	copy number loss	264923	SNP array	Genotyping	28
nssv15665074	copy number loss	14AG1958	SNP array	Genotyping	21

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15611568	Remapped	Perfect	NC_000008.11:g.(?_ 136665653)_(136850 357_?)del	GRCh38.p12	First Pass	NC_000008.11	Chr8	136,665,653	136,850,357
nssv15616815	Remapped	Perfect	NC_000008.11:g.(?_ 136665653)_(136850 357_?)del	GRCh38.p12	First Pass	NC_000008.11	Chr8	136,665,653	136,850,357
nssv15648219	Remapped	Perfect	NC_000008.11:g.(?_ 136665653)_(136850 357_?)del	GRCh38.p12	First Pass	NC_000008.11	Chr8	136,665,653	136,850,357
nssv15664902	Remapped	Perfect	NC_000008.11:g.(?_ 136665653)_(136850 357_?)del	GRCh38.p12	First Pass	NC_000008.11	Chr8	136,665,653	136,850,357
nssv15665074	Remapped	Perfect	NC_000008.11:g.(?_ 136665653)_(136850 357_?)del	GRCh38.p12	First Pass	NC_000008.11	Chr8	136,665,653	136,850,357
nssv15611568	Submitted genomic		NC_000008.10:g.(?_ 137677896)_(137862 600_?)del	GRCh37 (hg19)		NC_000008.10	Chr8	137,677,896	137,862,600
nssv15616815	Submitted genomic		NC_000008.10:g.(?_ 137677896)_(137862 600_?)del	GRCh37 (hg19)		NC_000008.10	Chr8	137,677,896	137,862,600
nssv15648219	Submitted genomic		NC_000008.10:g.(?_ 137677896)_(137862 600_?)del	GRCh37 (hg19)		NC_000008.10	Chr8	137,677,896	137,862,600
nssv15664902	Submitted genomic		NC_000008.10:g.(?_ 137677896)_(137862 600_?)del	GRCh37 (hg19)		NC_000008.10	Chr8	137,677,896	137,862,600
nssv15665074	Submitted genomic		NC_000008.10:g.(?_ 137677896)_(137862 600_?)del	GRCh37 (hg19)		NC_000008.10	Chr8	137,677,896	137,862,600

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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