nsv4379505

Organism: Homo sapiens

Study:nstd173 (Zarrei et al. 2019)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:32
Validation:Not tested
Clinical Assertions: No
Region Size:33,069

Publication(s):Zarrei et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 1000 SVs from 83 studies. See in: genome view

Remapped(Score: Perfect):1,576,531-1,609,599

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv4379505	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000020.11	Chr20	1,576,531	1,609,599
nsv4379505	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000020.10	Chr20	1,557,177	1,590,245

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv15617324	copy number loss	1-0840-003	SNP array	Genotyping	26
nssv15617961	copy number loss	1-0877-003	SNP array	Genotyping	31
nssv15622570	copy number loss	1-0244-005	SNP array	Genotyping	26
nssv15624321	copy number loss	1-0045-002	SNP array	Genotyping	24
nssv15626795	copy number loss	1-0449-004	SNP array	Genotyping	23
nssv15627076	copy number loss	1-0445-003	SNP array	Genotyping	27
nssv15627833	copy number loss	1-0449-003	SNP array	Genotyping	12
nssv15637715	copy number loss	14-0154-003	SNP array	Genotyping	13
nssv15649339	copy number loss	2-1375-002	SNP array	Genotyping	23
nssv15651703	copy number loss	2-1546-003	SNP array	Genotyping	25
nssv15651870	copy number loss	2-1579-003	SNP array	Genotyping	18
nssv15656648	copy number loss	3-0090-001	SNP array	Genotyping	18
nssv15660121	copy number loss	3-0642-000	SNP array	Genotyping	25
nssv15660130	copy number loss	3-0651-000	SNP array	Genotyping	17
nssv15661548	copy number loss	4-0027-004	SNP array	Genotyping	23
nssv15662183	copy number loss	5-0119-001	SNP array	Genotyping	21
nssv15663096	copy number loss	4-0050-001	SNP array	Genotyping	24
nssv15673497	copy number loss	9-0032-003	SNP array	Genotyping	27
nssv15674559	copy number loss	9-0045-003	SNP array	Genotyping	20
nssv15682698	copy number loss	OCD113-1681	SNP array	Genotyping	19
nssv15684360	copy number loss	OCD1139-8473	SNP array	Genotyping	22
nssv15685330	copy number loss	OCD117-S_1697	SNP array	Genotyping	20
nssv15685827	copy number loss	OCD20-S_896383	SNP array	Genotyping	25
nssv15686547	copy number loss	OCD150-MC-253	SNP array	Genotyping	24
nssv15688756	copy number loss	OCD46-S_0625-5375-2	SNP array	Genotyping	15
nssv15691138	copy number loss	OCD27-S_896533	SNP array	Genotyping	23
nssv15694923	copy number loss	215138	SNP array	Genotyping	29
nssv15695891	copy number loss	214792	SNP array	Genotyping	22
nssv15697403	copy number loss	157172	SNP array	Genotyping	20
nssv15700286	copy number loss	200515	SNP array	Genotyping	20
nssv15702100	copy number loss	210574	SNP array	Genotyping	23
nssv15702428	copy number loss	158445	SNP array	Genotyping	23

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15617324	Remapped	Perfect	NC_000020.11:g.(?_ 1576531)_(1609599_ ?)del	GRCh38.p12	First Pass	NC_000020.11	Chr20	1,576,531	1,609,599
nssv15617961	Remapped	Perfect	NC_000020.11:g.(?_ 1576531)_(1609599_ ?)del	GRCh38.p12	First Pass	NC_000020.11	Chr20	1,576,531	1,609,599
nssv15622570	Remapped	Perfect	NC_000020.11:g.(?_ 1576531)_(1609599_ ?)del	GRCh38.p12	First Pass	NC_000020.11	Chr20	1,576,531	1,609,599
nssv15624321	Remapped	Perfect	NC_000020.11:g.(?_ 1576531)_(1609599_ ?)del	GRCh38.p12	First Pass	NC_000020.11	Chr20	1,576,531	1,609,599
nssv15626795	Remapped	Perfect	NC_000020.11:g.(?_ 1576531)_(1609599_ ?)del	GRCh38.p12	First Pass	NC_000020.11	Chr20	1,576,531	1,609,599
nssv15627076	Remapped	Perfect	NC_000020.11:g.(?_ 1576531)_(1609599_ ?)del	GRCh38.p12	First Pass	NC_000020.11	Chr20	1,576,531	1,609,599
nssv15627833	Remapped	Perfect	NC_000020.11:g.(?_ 1576531)_(1609599_ ?)del	GRCh38.p12	First Pass	NC_000020.11	Chr20	1,576,531	1,609,599
nssv15637715	Remapped	Perfect	NC_000020.11:g.(?_ 1576531)_(1609599_ ?)del	GRCh38.p12	First Pass	NC_000020.11	Chr20	1,576,531	1,609,599
nssv15649339	Remapped	Perfect	NC_000020.11:g.(?_ 1576531)_(1609599_ ?)del	GRCh38.p12	First Pass	NC_000020.11	Chr20	1,576,531	1,609,599
nssv15651703	Remapped	Perfect	NC_000020.11:g.(?_ 1576531)_(1609599_ ?)del	GRCh38.p12	First Pass	NC_000020.11	Chr20	1,576,531	1,609,599
nssv15651870	Remapped	Perfect	NC_000020.11:g.(?_ 1576531)_(1609599_ ?)del	GRCh38.p12	First Pass	NC_000020.11	Chr20	1,576,531	1,609,599
nssv15656648	Remapped	Perfect	NC_000020.11:g.(?_ 1576531)_(1609599_ ?)del	GRCh38.p12	First Pass	NC_000020.11	Chr20	1,576,531	1,609,599
nssv15660121	Remapped	Perfect	NC_000020.11:g.(?_ 1576531)_(1609599_ ?)del	GRCh38.p12	First Pass	NC_000020.11	Chr20	1,576,531	1,609,599
nssv15660130	Remapped	Perfect	NC_000020.11:g.(?_ 1576531)_(1609599_ ?)del	GRCh38.p12	First Pass	NC_000020.11	Chr20	1,576,531	1,609,599
nssv15661548	Remapped	Perfect	NC_000020.11:g.(?_ 1576531)_(1609599_ ?)del	GRCh38.p12	First Pass	NC_000020.11	Chr20	1,576,531	1,609,599
nssv15662183	Remapped	Perfect	NC_000020.11:g.(?_ 1576531)_(1609599_ ?)del	GRCh38.p12	First Pass	NC_000020.11	Chr20	1,576,531	1,609,599
nssv15663096	Remapped	Perfect	NC_000020.11:g.(?_ 1576531)_(1609599_ ?)del	GRCh38.p12	First Pass	NC_000020.11	Chr20	1,576,531	1,609,599
nssv15673497	Remapped	Perfect	NC_000020.11:g.(?_ 1576531)_(1609599_ ?)del	GRCh38.p12	First Pass	NC_000020.11	Chr20	1,576,531	1,609,599
nssv15674559	Remapped	Perfect	NC_000020.11:g.(?_ 1576531)_(1609599_ ?)del	GRCh38.p12	First Pass	NC_000020.11	Chr20	1,576,531	1,609,599
nssv15682698	Remapped	Perfect	NC_000020.11:g.(?_ 1576531)_(1609599_ ?)del	GRCh38.p12	First Pass	NC_000020.11	Chr20	1,576,531	1,609,599
nssv15684360	Remapped	Perfect	NC_000020.11:g.(?_ 1576531)_(1609599_ ?)del	GRCh38.p12	First Pass	NC_000020.11	Chr20	1,576,531	1,609,599
nssv15685330	Remapped	Perfect	NC_000020.11:g.(?_ 1576531)_(1609599_ ?)del	GRCh38.p12	First Pass	NC_000020.11	Chr20	1,576,531	1,609,599
nssv15685827	Remapped	Perfect	NC_000020.11:g.(?_ 1576531)_(1609599_ ?)del	GRCh38.p12	First Pass	NC_000020.11	Chr20	1,576,531	1,609,599
nssv15686547	Remapped	Perfect	NC_000020.11:g.(?_ 1576531)_(1609599_ ?)del	GRCh38.p12	First Pass	NC_000020.11	Chr20	1,576,531	1,609,599
nssv15688756	Remapped	Perfect	NC_000020.11:g.(?_ 1576531)_(1609599_ ?)del	GRCh38.p12	First Pass	NC_000020.11	Chr20	1,576,531	1,609,599
nssv15691138	Remapped	Perfect	NC_000020.11:g.(?_ 1576531)_(1609599_ ?)del	GRCh38.p12	First Pass	NC_000020.11	Chr20	1,576,531	1,609,599
nssv15694923	Remapped	Perfect	NC_000020.11:g.(?_ 1576531)_(1609599_ ?)del	GRCh38.p12	First Pass	NC_000020.11	Chr20	1,576,531	1,609,599
nssv15695891	Remapped	Perfect	NC_000020.11:g.(?_ 1576531)_(1609599_ ?)del	GRCh38.p12	First Pass	NC_000020.11	Chr20	1,576,531	1,609,599
nssv15697403	Remapped	Perfect	NC_000020.11:g.(?_ 1576531)_(1609599_ ?)del	GRCh38.p12	First Pass	NC_000020.11	Chr20	1,576,531	1,609,599
nssv15700286	Remapped	Perfect	NC_000020.11:g.(?_ 1576531)_(1609599_ ?)del	GRCh38.p12	First Pass	NC_000020.11	Chr20	1,576,531	1,609,599
nssv15702100	Remapped	Perfect	NC_000020.11:g.(?_ 1576531)_(1609599_ ?)del	GRCh38.p12	First Pass	NC_000020.11	Chr20	1,576,531	1,609,599
nssv15702428	Remapped	Perfect	NC_000020.11:g.(?_ 1576531)_(1609599_ ?)del	GRCh38.p12	First Pass	NC_000020.11	Chr20	1,576,531	1,609,599
nssv15617324	Submitted genomic		NC_000020.10:g.(?_ 1557177)_(1590245_ ?)del	GRCh37 (hg19)		NC_000020.10	Chr20	1,557,177	1,590,245
nssv15617961	Submitted genomic		NC_000020.10:g.(?_ 1557177)_(1590245_ ?)del	GRCh37 (hg19)		NC_000020.10	Chr20	1,557,177	1,590,245
nssv15622570	Submitted genomic		NC_000020.10:g.(?_ 1557177)_(1590245_ ?)del	GRCh37 (hg19)		NC_000020.10	Chr20	1,557,177	1,590,245
nssv15624321	Submitted genomic		NC_000020.10:g.(?_ 1557177)_(1590245_ ?)del	GRCh37 (hg19)		NC_000020.10	Chr20	1,557,177	1,590,245
nssv15626795	Submitted genomic		NC_000020.10:g.(?_ 1557177)_(1590245_ ?)del	GRCh37 (hg19)		NC_000020.10	Chr20	1,557,177	1,590,245
nssv15627076	Submitted genomic		NC_000020.10:g.(?_ 1557177)_(1590245_ ?)del	GRCh37 (hg19)		NC_000020.10	Chr20	1,557,177	1,590,245
nssv15627833	Submitted genomic		NC_000020.10:g.(?_ 1557177)_(1590245_ ?)del	GRCh37 (hg19)		NC_000020.10	Chr20	1,557,177	1,590,245
nssv15637715	Submitted genomic		NC_000020.10:g.(?_ 1557177)_(1590245_ ?)del	GRCh37 (hg19)		NC_000020.10	Chr20	1,557,177	1,590,245
nssv15649339	Submitted genomic		NC_000020.10:g.(?_ 1557177)_(1590245_ ?)del	GRCh37 (hg19)		NC_000020.10	Chr20	1,557,177	1,590,245
nssv15651703	Submitted genomic		NC_000020.10:g.(?_ 1557177)_(1590245_ ?)del	GRCh37 (hg19)		NC_000020.10	Chr20	1,557,177	1,590,245
nssv15651870	Submitted genomic		NC_000020.10:g.(?_ 1557177)_(1590245_ ?)del	GRCh37 (hg19)		NC_000020.10	Chr20	1,557,177	1,590,245
nssv15656648	Submitted genomic		NC_000020.10:g.(?_ 1557177)_(1590245_ ?)del	GRCh37 (hg19)		NC_000020.10	Chr20	1,557,177	1,590,245
nssv15660121	Submitted genomic		NC_000020.10:g.(?_ 1557177)_(1590245_ ?)del	GRCh37 (hg19)		NC_000020.10	Chr20	1,557,177	1,590,245
nssv15660130	Submitted genomic		NC_000020.10:g.(?_ 1557177)_(1590245_ ?)del	GRCh37 (hg19)		NC_000020.10	Chr20	1,557,177	1,590,245
nssv15661548	Submitted genomic		NC_000020.10:g.(?_ 1557177)_(1590245_ ?)del	GRCh37 (hg19)		NC_000020.10	Chr20	1,557,177	1,590,245
nssv15662183	Submitted genomic		NC_000020.10:g.(?_ 1557177)_(1590245_ ?)del	GRCh37 (hg19)		NC_000020.10	Chr20	1,557,177	1,590,245
nssv15663096	Submitted genomic		NC_000020.10:g.(?_ 1557177)_(1590245_ ?)del	GRCh37 (hg19)		NC_000020.10	Chr20	1,557,177	1,590,245
nssv15673497	Submitted genomic		NC_000020.10:g.(?_ 1557177)_(1590245_ ?)del	GRCh37 (hg19)		NC_000020.10	Chr20	1,557,177	1,590,245
nssv15674559	Submitted genomic		NC_000020.10:g.(?_ 1557177)_(1590245_ ?)del	GRCh37 (hg19)		NC_000020.10	Chr20	1,557,177	1,590,245
nssv15682698	Submitted genomic		NC_000020.10:g.(?_ 1557177)_(1590245_ ?)del	GRCh37 (hg19)		NC_000020.10	Chr20	1,557,177	1,590,245
nssv15684360	Submitted genomic		NC_000020.10:g.(?_ 1557177)_(1590245_ ?)del	GRCh37 (hg19)		NC_000020.10	Chr20	1,557,177	1,590,245
nssv15685330	Submitted genomic		NC_000020.10:g.(?_ 1557177)_(1590245_ ?)del	GRCh37 (hg19)		NC_000020.10	Chr20	1,557,177	1,590,245
nssv15685827	Submitted genomic		NC_000020.10:g.(?_ 1557177)_(1590245_ ?)del	GRCh37 (hg19)		NC_000020.10	Chr20	1,557,177	1,590,245
nssv15686547	Submitted genomic		NC_000020.10:g.(?_ 1557177)_(1590245_ ?)del	GRCh37 (hg19)		NC_000020.10	Chr20	1,557,177	1,590,245
nssv15688756	Submitted genomic		NC_000020.10:g.(?_ 1557177)_(1590245_ ?)del	GRCh37 (hg19)		NC_000020.10	Chr20	1,557,177	1,590,245
nssv15691138	Submitted genomic		NC_000020.10:g.(?_ 1557177)_(1590245_ ?)del	GRCh37 (hg19)		NC_000020.10	Chr20	1,557,177	1,590,245
nssv15694923	Submitted genomic		NC_000020.10:g.(?_ 1557177)_(1590245_ ?)del	GRCh37 (hg19)		NC_000020.10	Chr20	1,557,177	1,590,245
nssv15695891	Submitted genomic		NC_000020.10:g.(?_ 1557177)_(1590245_ ?)del	GRCh37 (hg19)		NC_000020.10	Chr20	1,557,177	1,590,245
nssv15697403	Submitted genomic		NC_000020.10:g.(?_ 1557177)_(1590245_ ?)del	GRCh37 (hg19)		NC_000020.10	Chr20	1,557,177	1,590,245
nssv15700286	Submitted genomic		NC_000020.10:g.(?_ 1557177)_(1590245_ ?)del	GRCh37 (hg19)		NC_000020.10	Chr20	1,557,177	1,590,245
nssv15702100	Submitted genomic		NC_000020.10:g.(?_ 1557177)_(1590245_ ?)del	GRCh37 (hg19)		NC_000020.10	Chr20	1,557,177	1,590,245
nssv15702428	Submitted genomic		NC_000020.10:g.(?_ 1557177)_(1590245_ ?)del	GRCh37 (hg19)		NC_000020.10	Chr20	1,557,177	1,590,245

dbVar

Database of genomic structural variation

nsv4379505

Links to Other Resources

Genome View

Variant Region Placement Information

Variant Call Information

Variant Call Placement Information

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant