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dbVar

Database of genomic structural variation

nsv4379833

Organism: Homo sapiens

Study:nstd173 (Zarrei et al. 2019)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:5
Validation:Not tested
Clinical Assertions: No
Region Size:43,766

Publication(s):Zarrei et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 622 SVs from 74 studies. See in: genome view

Remapped(Score: Perfect):31,866,941-31,910,706

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv4379833	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000012.12	Chr12	31,866,941	31,910,706
nsv4379833	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000012.11	Chr12	32,019,875	32,063,640

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv15635693	copy number gain	11-0052-003	SNP array	Genotyping	20
nssv15656367	copy number gain	2-1715-003	SNP array	Genotyping	25
nssv15663043	copy number gain	4-0046-001	SNP array	Genotyping	29
nssv15667146	copy number gain	7-0122-003	SNP array	Genotyping	17
nssv15673548	copy number gain	9-0042-002	SNP array	Genotyping	21

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15635693	Remapped	Perfect	NC_000012.12:g.(?_ 31866941)_(3191070 6_?)dup	GRCh38.p12	First Pass	NC_000012.12	Chr12	31,866,941	31,910,706
nssv15656367	Remapped	Perfect	NC_000012.12:g.(?_ 31866941)_(3191070 6_?)dup	GRCh38.p12	First Pass	NC_000012.12	Chr12	31,866,941	31,910,706
nssv15663043	Remapped	Perfect	NC_000012.12:g.(?_ 31866941)_(3191070 6_?)dup	GRCh38.p12	First Pass	NC_000012.12	Chr12	31,866,941	31,910,706
nssv15667146	Remapped	Perfect	NC_000012.12:g.(?_ 31866941)_(3191070 6_?)dup	GRCh38.p12	First Pass	NC_000012.12	Chr12	31,866,941	31,910,706
nssv15673548	Remapped	Perfect	NC_000012.12:g.(?_ 31866941)_(3191070 6_?)dup	GRCh38.p12	First Pass	NC_000012.12	Chr12	31,866,941	31,910,706
nssv15635693	Submitted genomic		NC_000012.11:g.(?_ 32019875)_(3206364 0_?)dup	GRCh37 (hg19)		NC_000012.11	Chr12	32,019,875	32,063,640
nssv15656367	Submitted genomic		NC_000012.11:g.(?_ 32019875)_(3206364 0_?)dup	GRCh37 (hg19)		NC_000012.11	Chr12	32,019,875	32,063,640
nssv15663043	Submitted genomic		NC_000012.11:g.(?_ 32019875)_(3206364 0_?)dup	GRCh37 (hg19)		NC_000012.11	Chr12	32,019,875	32,063,640
nssv15667146	Submitted genomic		NC_000012.11:g.(?_ 32019875)_(3206364 0_?)dup	GRCh37 (hg19)		NC_000012.11	Chr12	32,019,875	32,063,640
nssv15673548	Submitted genomic		NC_000012.11:g.(?_ 32019875)_(3206364 0_?)dup	GRCh37 (hg19)		NC_000012.11	Chr12	32,019,875	32,063,640

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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