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dbVar

Database of genomic structural variation

nsv4380276

Organism: Homo sapiens

Study:nstd173 (Zarrei et al. 2019)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:3
Validation:Not tested
Clinical Assertions: No
Region Size:20,271

Publication(s):Zarrei et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 264 SVs from 42 studies. See in: genome view

Remapped(Score: Perfect):101,375,797-101,396,067

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv4380276	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000008.11	Chr8	101,375,797	101,396,067
nsv4380276	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000008.10	Chr8	102,388,025	102,408,295

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv15614501	copy number loss	1-0763-004	SNP array	Genotyping	28
nssv15662663	copy number loss	5-0126-003	SNP array	Genotyping	29
nssv15663790	copy number loss	5-0126-001	SNP array	Genotyping	18

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15614501	Remapped	Perfect	NC_000008.11:g.(?_ 101375797)_(101396 067_?)del	GRCh38.p12	First Pass	NC_000008.11	Chr8	101,375,797	101,396,067
nssv15662663	Remapped	Perfect	NC_000008.11:g.(?_ 101375797)_(101396 067_?)del	GRCh38.p12	First Pass	NC_000008.11	Chr8	101,375,797	101,396,067
nssv15663790	Remapped	Perfect	NC_000008.11:g.(?_ 101375797)_(101396 067_?)del	GRCh38.p12	First Pass	NC_000008.11	Chr8	101,375,797	101,396,067
nssv15614501	Submitted genomic		NC_000008.10:g.(?_ 102388025)_(102408 295_?)del	GRCh37 (hg19)		NC_000008.10	Chr8	102,388,025	102,408,295
nssv15662663	Submitted genomic		NC_000008.10:g.(?_ 102388025)_(102408 295_?)del	GRCh37 (hg19)		NC_000008.10	Chr8	102,388,025	102,408,295
nssv15663790	Submitted genomic		NC_000008.10:g.(?_ 102388025)_(102408 295_?)del	GRCh37 (hg19)		NC_000008.10	Chr8	102,388,025	102,408,295

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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