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dbVar

Database of genomic structural variation

nsv4380421

Organism: Homo sapiens

Study:nstd173 (Zarrei et al. 2019)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:24,931

Publication(s):Zarrei et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 448 SVs from 72 studies. See in: genome view

Remapped(Score: Perfect):29,630,209-29,655,139

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv4380421	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000007.14	Chr7	29,630,209	29,655,139
nsv4380421	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000007.13	Chr7	29,669,825	29,694,755

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv15629262	copy number loss	1-0574-004	SNP array	Genotyping	19
nssv15632069	copy number loss	10-0009-002	SNP array	Genotyping	21

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15629262	Remapped	Perfect	NC_000007.14:g.(?_ 29630209)_(2965513 9_?)del	GRCh38.p12	First Pass	NC_000007.14	Chr7	29,630,209	29,655,139
nssv15632069	Remapped	Perfect	NC_000007.14:g.(?_ 29630209)_(2965513 9_?)del	GRCh38.p12	First Pass	NC_000007.14	Chr7	29,630,209	29,655,139
nssv15629262	Submitted genomic		NC_000007.13:g.(?_ 29669825)_(2969475 5_?)del	GRCh37 (hg19)		NC_000007.13	Chr7	29,669,825	29,694,755
nssv15632069	Submitted genomic		NC_000007.13:g.(?_ 29669825)_(2969475 5_?)del	GRCh37 (hg19)		NC_000007.13	Chr7	29,669,825	29,694,755

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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