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dbVar

Database of genomic structural variation

nsv4381305

Organism: Homo sapiens

Study:nstd173 (Zarrei et al. 2019)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:3
Validation:Not tested
Clinical Assertions: No
Region Size:67,826

Publication(s):Zarrei et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 938 SVs from 100 studies. See in: genome view

Remapped(Score: Perfect):160,942,675-161,010,500

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv4381305	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000004.12	Chr4	160,942,675	161,010,500
nsv4381305	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000004.11	Chr4	161,863,827	161,931,652

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv15614472	copy number gain	1-0762-003	SNP array	Genotyping	19
nssv15630750	copy number gain	1-0618-003	SNP array	Genotyping	21
nssv15639660	copy number gain	14-0265-002	SNP array	Genotyping	22

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15614472	Remapped	Perfect	NC_000004.12:g.(?_ 160942675)_(161010 500_?)dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	160,942,675	161,010,500
nssv15630750	Remapped	Perfect	NC_000004.12:g.(?_ 160942675)_(161010 500_?)dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	160,942,675	161,010,500
nssv15639660	Remapped	Perfect	NC_000004.12:g.(?_ 160942675)_(161010 500_?)dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	160,942,675	161,010,500
nssv15614472	Submitted genomic		NC_000004.11:g.(?_ 161863827)_(161931 652_?)dup	GRCh37 (hg19)		NC_000004.11	Chr4	161,863,827	161,931,652
nssv15630750	Submitted genomic		NC_000004.11:g.(?_ 161863827)_(161931 652_?)dup	GRCh37 (hg19)		NC_000004.11	Chr4	161,863,827	161,931,652
nssv15639660	Submitted genomic		NC_000004.11:g.(?_ 161863827)_(161931 652_?)dup	GRCh37 (hg19)		NC_000004.11	Chr4	161,863,827	161,931,652

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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