nsv4381874
- Organism: Homo sapiens
- Study:nstd173 (Zarrei et al. 2019)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37 (hg19)
- Variant Calls:28
- Validation:Not tested
- Clinical Assertions: No
- Region Size:143,139
- Publication(s):Zarrei et al. 2019
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 2222 SVs from 108 studies. See in: genome view
Overlapping variant regions from other studies: 2222 SVs from 108 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4381874 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000010.11 | Chr10 | 133,420,623 | 133,563,761 |
| nsv4381874 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000010.10 | Chr10 | 135,234,127 | 135,377,265 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv15614740 | copy number gain | 1-0751-003 | SNP array | Genotyping | 20 |
| nssv15615661 | copy number gain | 1-0760-004 | SNP array | Genotyping | 23 |
| nssv15617382 | copy number gain | 1-0843-003 | SNP array | Genotyping | 27 |
| nssv15622587 | copy number gain | 1-0228-001 | SNP array | Genotyping | 17 |
| nssv15623253 | copy number gain | 1-0228-004 | SNP array | Genotyping | 18 |
| nssv15623389 | copy number gain | 1-0236-001 | SNP array | Genotyping | 24 |
| nssv15628583 | copy number gain | 1-0059-004 | SNP array | Genotyping | 20 |
| nssv15629425 | copy number gain | 1-0559-001 | SNP array | Genotyping | 28 |
| nssv15640398 | copy number gain | 14-0152-004 | SNP array | Genotyping | 19 |
| nssv15642364 | copy number gain | 15-1117-002 | SNP array | Genotyping | 26 |
| nssv15654316 | copy number gain | 2-1626-003 | SNP array | Genotyping | 23 |
| nssv15662017 | copy number gain | 5-0074-003 | SNP array | Genotyping | 19 |
| nssv15668911 | copy number gain | 7-0073-004 | SNP array | Genotyping | 26 |
| nssv15672083 | copy number gain | 9-0013-002 | SNP array | Genotyping | 20 |
| nssv15673262 | copy number gain | 9-0037-001 | SNP array | Genotyping | 13 |
| nssv15673278 | copy number gain | 9-0037-003 | SNP array | Genotyping | 19 |
| nssv15673524 | copy number gain | 9-0042-001 | SNP array | Genotyping | 18 |
| nssv15674475 | copy number gain | 9-0043-003 | SNP array | Genotyping | 20 |
| nssv15675390 | copy number gain | 234386S | SNP array | Genotyping | 20 |
| nssv15676497 | copy number gain | 236818S | SNP array | Genotyping | 16 |
| nssv15680636 | copy number gain | 214103 | SNP array | Genotyping | 19 |
| nssv15682079 | copy number gain | 218112 | SNP array | Genotyping | 38 |
| nssv15687100 | copy number gain | OCD32-S_896581 | SNP array | Genotyping | 31 |
| nssv15691152 | copy number gain | OCD28-S_896541 | SNP array | Genotyping | 22 |
| nssv15691485 | copy number gain | OCD43-B_DF-1236 | SNP array | Genotyping | 15 |
| nssv15696594 | copy number gain | 160876 | SNP array | Genotyping | 13 |
| nssv15700352 | copy number gain | 201955 | SNP array | Genotyping | 21 |
| nssv15702492 | copy number gain | 190783 | SNP array | Genotyping | 24 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv15614740 | Remapped | Perfect | NC_000010.11:g.(?_ 133420623)_(133563 761_?)dup | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 133,420,623 | 133,563,761 |
| nssv15615661 | Remapped | Perfect | NC_000010.11:g.(?_ 133420623)_(133563 761_?)dup | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 133,420,623 | 133,563,761 |
| nssv15617382 | Remapped | Perfect | NC_000010.11:g.(?_ 133420623)_(133563 761_?)dup | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 133,420,623 | 133,563,761 |
| nssv15622587 | Remapped | Perfect | NC_000010.11:g.(?_ 133420623)_(133563 761_?)dup | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 133,420,623 | 133,563,761 |
| nssv15623253 | Remapped | Perfect | NC_000010.11:g.(?_ 133420623)_(133563 761_?)dup | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 133,420,623 | 133,563,761 |
| nssv15623389 | Remapped | Perfect | NC_000010.11:g.(?_ 133420623)_(133563 761_?)dup | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 133,420,623 | 133,563,761 |
| nssv15628583 | Remapped | Perfect | NC_000010.11:g.(?_ 133420623)_(133563 761_?)dup | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 133,420,623 | 133,563,761 |
| nssv15629425 | Remapped | Perfect | NC_000010.11:g.(?_ 133420623)_(133563 761_?)dup | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 133,420,623 | 133,563,761 |
| nssv15640398 | Remapped | Perfect | NC_000010.11:g.(?_ 133420623)_(133563 761_?)dup | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 133,420,623 | 133,563,761 |
| nssv15642364 | Remapped | Perfect | NC_000010.11:g.(?_ 133420623)_(133563 761_?)dup | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 133,420,623 | 133,563,761 |
| nssv15654316 | Remapped | Perfect | NC_000010.11:g.(?_ 133420623)_(133563 761_?)dup | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 133,420,623 | 133,563,761 |
| nssv15662017 | Remapped | Perfect | NC_000010.11:g.(?_ 133420623)_(133563 761_?)dup | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 133,420,623 | 133,563,761 |
| nssv15668911 | Remapped | Perfect | NC_000010.11:g.(?_ 133420623)_(133563 761_?)dup | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 133,420,623 | 133,563,761 |
| nssv15672083 | Remapped | Perfect | NC_000010.11:g.(?_ 133420623)_(133563 761_?)dup | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 133,420,623 | 133,563,761 |
| nssv15673262 | Remapped | Perfect | NC_000010.11:g.(?_ 133420623)_(133563 761_?)dup | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 133,420,623 | 133,563,761 |
| nssv15673278 | Remapped | Perfect | NC_000010.11:g.(?_ 133420623)_(133563 761_?)dup | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 133,420,623 | 133,563,761 |
| nssv15673524 | Remapped | Perfect | NC_000010.11:g.(?_ 133420623)_(133563 761_?)dup | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 133,420,623 | 133,563,761 |
| nssv15674475 | Remapped | Perfect | NC_000010.11:g.(?_ 133420623)_(133563 761_?)dup | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 133,420,623 | 133,563,761 |
| nssv15675390 | Remapped | Perfect | NC_000010.11:g.(?_ 133420623)_(133563 761_?)dup | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 133,420,623 | 133,563,761 |
| nssv15676497 | Remapped | Perfect | NC_000010.11:g.(?_ 133420623)_(133563 761_?)dup | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 133,420,623 | 133,563,761 |
| nssv15680636 | Remapped | Perfect | NC_000010.11:g.(?_ 133420623)_(133563 761_?)dup | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 133,420,623 | 133,563,761 |
| nssv15682079 | Remapped | Perfect | NC_000010.11:g.(?_ 133420623)_(133563 761_?)dup | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 133,420,623 | 133,563,761 |
| nssv15687100 | Remapped | Perfect | NC_000010.11:g.(?_ 133420623)_(133563 761_?)dup | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 133,420,623 | 133,563,761 |
| nssv15691152 | Remapped | Perfect | NC_000010.11:g.(?_ 133420623)_(133563 761_?)dup | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 133,420,623 | 133,563,761 |
| nssv15691485 | Remapped | Perfect | NC_000010.11:g.(?_ 133420623)_(133563 761_?)dup | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 133,420,623 | 133,563,761 |
| nssv15696594 | Remapped | Perfect | NC_000010.11:g.(?_ 133420623)_(133563 761_?)dup | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 133,420,623 | 133,563,761 |
| nssv15700352 | Remapped | Perfect | NC_000010.11:g.(?_ 133420623)_(133563 761_?)dup | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 133,420,623 | 133,563,761 |
| nssv15702492 | Remapped | Perfect | NC_000010.11:g.(?_ 133420623)_(133563 761_?)dup | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 133,420,623 | 133,563,761 |
| nssv15614740 | Submitted genomic | NC_000010.10:g.(?_ 135234127)_(135377 265_?)dup | GRCh37 (hg19) | NC_000010.10 | Chr10 | 135,234,127 | 135,377,265 | ||
| nssv15615661 | Submitted genomic | NC_000010.10:g.(?_ 135234127)_(135377 265_?)dup | GRCh37 (hg19) | NC_000010.10 | Chr10 | 135,234,127 | 135,377,265 | ||
| nssv15617382 | Submitted genomic | NC_000010.10:g.(?_ 135234127)_(135377 265_?)dup | GRCh37 (hg19) | NC_000010.10 | Chr10 | 135,234,127 | 135,377,265 | ||
| nssv15622587 | Submitted genomic | NC_000010.10:g.(?_ 135234127)_(135377 265_?)dup | GRCh37 (hg19) | NC_000010.10 | Chr10 | 135,234,127 | 135,377,265 | ||
| nssv15623253 | Submitted genomic | NC_000010.10:g.(?_ 135234127)_(135377 265_?)dup | GRCh37 (hg19) | NC_000010.10 | Chr10 | 135,234,127 | 135,377,265 | ||
| nssv15623389 | Submitted genomic | NC_000010.10:g.(?_ 135234127)_(135377 265_?)dup | GRCh37 (hg19) | NC_000010.10 | Chr10 | 135,234,127 | 135,377,265 | ||
| nssv15628583 | Submitted genomic | NC_000010.10:g.(?_ 135234127)_(135377 265_?)dup | GRCh37 (hg19) | NC_000010.10 | Chr10 | 135,234,127 | 135,377,265 | ||
| nssv15629425 | Submitted genomic | NC_000010.10:g.(?_ 135234127)_(135377 265_?)dup | GRCh37 (hg19) | NC_000010.10 | Chr10 | 135,234,127 | 135,377,265 | ||
| nssv15640398 | Submitted genomic | NC_000010.10:g.(?_ 135234127)_(135377 265_?)dup | GRCh37 (hg19) | NC_000010.10 | Chr10 | 135,234,127 | 135,377,265 | ||
| nssv15642364 | Submitted genomic | NC_000010.10:g.(?_ 135234127)_(135377 265_?)dup | GRCh37 (hg19) | NC_000010.10 | Chr10 | 135,234,127 | 135,377,265 | ||
| nssv15654316 | Submitted genomic | NC_000010.10:g.(?_ 135234127)_(135377 265_?)dup | GRCh37 (hg19) | NC_000010.10 | Chr10 | 135,234,127 | 135,377,265 | ||
| nssv15662017 | Submitted genomic | NC_000010.10:g.(?_ 135234127)_(135377 265_?)dup | GRCh37 (hg19) | NC_000010.10 | Chr10 | 135,234,127 | 135,377,265 | ||
| nssv15668911 | Submitted genomic | NC_000010.10:g.(?_ 135234127)_(135377 265_?)dup | GRCh37 (hg19) | NC_000010.10 | Chr10 | 135,234,127 | 135,377,265 | ||
| nssv15672083 | Submitted genomic | NC_000010.10:g.(?_ 135234127)_(135377 265_?)dup | GRCh37 (hg19) | NC_000010.10 | Chr10 | 135,234,127 | 135,377,265 | ||
| nssv15673262 | Submitted genomic | NC_000010.10:g.(?_ 135234127)_(135377 265_?)dup | GRCh37 (hg19) | NC_000010.10 | Chr10 | 135,234,127 | 135,377,265 | ||
| nssv15673278 | Submitted genomic | NC_000010.10:g.(?_ 135234127)_(135377 265_?)dup | GRCh37 (hg19) | NC_000010.10 | Chr10 | 135,234,127 | 135,377,265 | ||
| nssv15673524 | Submitted genomic | NC_000010.10:g.(?_ 135234127)_(135377 265_?)dup | GRCh37 (hg19) | NC_000010.10 | Chr10 | 135,234,127 | 135,377,265 | ||
| nssv15674475 | Submitted genomic | NC_000010.10:g.(?_ 135234127)_(135377 265_?)dup | GRCh37 (hg19) | NC_000010.10 | Chr10 | 135,234,127 | 135,377,265 | ||
| nssv15675390 | Submitted genomic | NC_000010.10:g.(?_ 135234127)_(135377 265_?)dup | GRCh37 (hg19) | NC_000010.10 | Chr10 | 135,234,127 | 135,377,265 | ||
| nssv15676497 | Submitted genomic | NC_000010.10:g.(?_ 135234127)_(135377 265_?)dup | GRCh37 (hg19) | NC_000010.10 | Chr10 | 135,234,127 | 135,377,265 | ||
| nssv15680636 | Submitted genomic | NC_000010.10:g.(?_ 135234127)_(135377 265_?)dup | GRCh37 (hg19) | NC_000010.10 | Chr10 | 135,234,127 | 135,377,265 | ||
| nssv15682079 | Submitted genomic | NC_000010.10:g.(?_ 135234127)_(135377 265_?)dup | GRCh37 (hg19) | NC_000010.10 | Chr10 | 135,234,127 | 135,377,265 | ||
| nssv15687100 | Submitted genomic | NC_000010.10:g.(?_ 135234127)_(135377 265_?)dup | GRCh37 (hg19) | NC_000010.10 | Chr10 | 135,234,127 | 135,377,265 | ||
| nssv15691152 | Submitted genomic | NC_000010.10:g.(?_ 135234127)_(135377 265_?)dup | GRCh37 (hg19) | NC_000010.10 | Chr10 | 135,234,127 | 135,377,265 | ||
| nssv15691485 | Submitted genomic | NC_000010.10:g.(?_ 135234127)_(135377 265_?)dup | GRCh37 (hg19) | NC_000010.10 | Chr10 | 135,234,127 | 135,377,265 | ||
| nssv15696594 | Submitted genomic | NC_000010.10:g.(?_ 135234127)_(135377 265_?)dup | GRCh37 (hg19) | NC_000010.10 | Chr10 | 135,234,127 | 135,377,265 | ||
| nssv15700352 | Submitted genomic | NC_000010.10:g.(?_ 135234127)_(135377 265_?)dup | GRCh37 (hg19) | NC_000010.10 | Chr10 | 135,234,127 | 135,377,265 | ||
| nssv15702492 | Submitted genomic | NC_000010.10:g.(?_ 135234127)_(135377 265_?)dup | GRCh37 (hg19) | NC_000010.10 | Chr10 | 135,234,127 | 135,377,265 |