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dbVar

Database of genomic structural variation

nsv4382152

Organism: Homo sapiens

Study:nstd173 (Zarrei et al. 2019)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:3
Validation:Not tested
Clinical Assertions: No
Region Size:55,198

Publication(s):Zarrei et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 361 SVs from 60 studies. See in: genome view

Remapped(Score: Perfect):109,691,544-109,746,741

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv4382152	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000002.12	Chr2	109,691,544	109,746,741
nsv4382152	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000002.11	Chr2	110,449,121	110,504,318

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv15643653	copy number loss	2-0018-003	SNP array	Genotyping	23
nssv15643673	copy number loss	2-0018-004	SNP array	Genotyping	16
nssv15646269	copy number loss	2-0018-002	SNP array	Genotyping	20

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15643653	Remapped	Perfect	NC_000002.12:g.(?_ 109691544)_(109746 741_?)del	GRCh38.p12	First Pass	NC_000002.12	Chr2	109,691,544	109,746,741
nssv15643673	Remapped	Perfect	NC_000002.12:g.(?_ 109691544)_(109746 741_?)del	GRCh38.p12	First Pass	NC_000002.12	Chr2	109,691,544	109,746,741
nssv15646269	Remapped	Perfect	NC_000002.12:g.(?_ 109691544)_(109746 741_?)del	GRCh38.p12	First Pass	NC_000002.12	Chr2	109,691,544	109,746,741
nssv15643653	Submitted genomic		NC_000002.11:g.(?_ 110449121)_(110504 318_?)del	GRCh37 (hg19)		NC_000002.11	Chr2	110,449,121	110,504,318
nssv15643673	Submitted genomic		NC_000002.11:g.(?_ 110449121)_(110504 318_?)del	GRCh37 (hg19)		NC_000002.11	Chr2	110,449,121	110,504,318
nssv15646269	Submitted genomic		NC_000002.11:g.(?_ 110449121)_(110504 318_?)del	GRCh37 (hg19)		NC_000002.11	Chr2	110,449,121	110,504,318

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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