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dbVar

Database of genomic structural variation

nsv4382288

Organism: Homo sapiens

Study:nstd173 (Zarrei et al. 2019)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:3
Validation:Not tested
Clinical Assertions: No
Region Size:75,394

Publication(s):Zarrei et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 548 SVs from 72 studies. See in: genome view

Remapped(Score: Perfect):89,741,650-89,817,043

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv4382288	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000011.10	Chr11	89,741,650	89,817,043
nsv4382288	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000011.9	Chr11	89,474,818	89,550,211

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv15629265	copy number loss	1-0574-004	SNP array	Genotyping	19
nssv15632978	copy number loss	10-1090-001	SNP array	Genotyping	26
nssv15662644	copy number loss	5-0126-001	SNP array	Genotyping	18

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15629265	Remapped	Perfect	NC_000011.10:g.(?_ 89741650)_(8981704 3_?)del	GRCh38.p12	First Pass	NC_000011.10	Chr11	89,741,650	89,817,043
nssv15632978	Remapped	Perfect	NC_000011.10:g.(?_ 89741650)_(8981704 3_?)del	GRCh38.p12	First Pass	NC_000011.10	Chr11	89,741,650	89,817,043
nssv15662644	Remapped	Perfect	NC_000011.10:g.(?_ 89741650)_(8981704 3_?)del	GRCh38.p12	First Pass	NC_000011.10	Chr11	89,741,650	89,817,043
nssv15629265	Submitted genomic		NC_000011.9:g.(?_8 9474818)_(89550211 _?)del	GRCh37 (hg19)		NC_000011.9	Chr11	89,474,818	89,550,211
nssv15632978	Submitted genomic		NC_000011.9:g.(?_8 9474818)_(89550211 _?)del	GRCh37 (hg19)		NC_000011.9	Chr11	89,474,818	89,550,211
nssv15662644	Submitted genomic		NC_000011.9:g.(?_8 9474818)_(89550211 _?)del	GRCh37 (hg19)		NC_000011.9	Chr11	89,474,818	89,550,211

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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