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dbVar

Database of genomic structural variation

nsv4382413

Organism: Homo sapiens

Study:nstd173 (Zarrei et al. 2019)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:49,465

Publication(s):Zarrei et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 500 SVs from 63 studies. See in: genome view

Remapped(Score: Perfect):94,235,678-94,285,142

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv4382413	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000015.10	Chr15	94,235,678	94,285,142
nsv4382413	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000015.9	Chr15	94,778,907	94,828,371

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv15616417	copy number loss	1-0824-003	SNP array	Genotyping	22
nssv15692693	copy number loss	OCD53-S_0625-8346-3	SNP array	Genotyping	17

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15616417	Remapped	Perfect	NC_000015.10:g.(?_ 94235678)_(9428514 2_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	94,235,678	94,285,142
nssv15692693	Remapped	Perfect	NC_000015.10:g.(?_ 94235678)_(9428514 2_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	94,235,678	94,285,142
nssv15616417	Submitted genomic		NC_000015.9:g.(?_9 4778907)_(94828371 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	94,778,907	94,828,371
nssv15692693	Submitted genomic		NC_000015.9:g.(?_9 4778907)_(94828371 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	94,778,907	94,828,371

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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