nsv4382872

Organism: Homo sapiens

Study:nstd173 (Zarrei et al. 2019)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:15
Validation:Not tested
Clinical Assertions: No
Region Size:32,364

Publication(s):Zarrei et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 798 SVs from 81 studies. See in: genome view

Remapped(Score: Perfect):73,554,052-73,586,415

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv4382872	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000014.9	Chr14	73,554,052	73,586,415
nsv4382872	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000014.8	Chr14	74,020,756	74,053,119

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv15612344	copy number loss	1-0665-002	SNP array	Genotyping	13
nssv15613469	copy number loss	1-0684-003	SNP array	Genotyping	21
nssv15613692	copy number loss	1-0134-004	SNP array	Genotyping	17
nssv15624077	copy number loss	1-0291-001	SNP array	Genotyping	12
nssv15633040	copy number loss	10-1104-002	SNP array	Genotyping	24
nssv15633909	copy number loss	10-1155-002	SNP array	Genotyping	23
nssv15633956	copy number loss	10-1155-004	SNP array	Genotyping	21
nssv15655318	copy number loss	2-1735-003	SNP array	Genotyping	26
nssv15664052	copy number loss	6-0403-003	SNP array	Genotyping	19
nssv15684378	copy number loss	OCD114-B_1684	SNP array	Genotyping	21
nssv15684662	copy number loss	OCD153-AD-1367(188568)	SNP array	Genotyping	20
nssv15690538	copy number loss	OCD145-KM-1348	SNP array	Genotyping	20
nssv15692589	copy number loss	OCD66-SL-1263(189803)	SNP array	Genotyping	16
nssv15698095	copy number loss	174929	SNP array	Genotyping	18
nssv15699955	copy number loss	209017	SNP array	Genotyping	23

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15612344	Remapped	Perfect	NC_000014.9:g.(?_7 3554052)_(73586415 _?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	73,554,052	73,586,415
nssv15613469	Remapped	Perfect	NC_000014.9:g.(?_7 3554052)_(73586415 _?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	73,554,052	73,586,415
nssv15613692	Remapped	Perfect	NC_000014.9:g.(?_7 3554052)_(73586415 _?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	73,554,052	73,586,415
nssv15624077	Remapped	Perfect	NC_000014.9:g.(?_7 3554052)_(73586415 _?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	73,554,052	73,586,415
nssv15633040	Remapped	Perfect	NC_000014.9:g.(?_7 3554052)_(73586415 _?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	73,554,052	73,586,415
nssv15633909	Remapped	Perfect	NC_000014.9:g.(?_7 3554052)_(73586415 _?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	73,554,052	73,586,415
nssv15633956	Remapped	Perfect	NC_000014.9:g.(?_7 3554052)_(73586415 _?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	73,554,052	73,586,415
nssv15655318	Remapped	Perfect	NC_000014.9:g.(?_7 3554052)_(73586415 _?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	73,554,052	73,586,415
nssv15664052	Remapped	Perfect	NC_000014.9:g.(?_7 3554052)_(73586415 _?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	73,554,052	73,586,415
nssv15684378	Remapped	Perfect	NC_000014.9:g.(?_7 3554052)_(73586415 _?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	73,554,052	73,586,415
nssv15684662	Remapped	Perfect	NC_000014.9:g.(?_7 3554052)_(73586415 _?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	73,554,052	73,586,415
nssv15690538	Remapped	Perfect	NC_000014.9:g.(?_7 3554052)_(73586415 _?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	73,554,052	73,586,415
nssv15692589	Remapped	Perfect	NC_000014.9:g.(?_7 3554052)_(73586415 _?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	73,554,052	73,586,415
nssv15698095	Remapped	Perfect	NC_000014.9:g.(?_7 3554052)_(73586415 _?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	73,554,052	73,586,415
nssv15699955	Remapped	Perfect	NC_000014.9:g.(?_7 3554052)_(73586415 _?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	73,554,052	73,586,415
nssv15612344	Submitted genomic		NC_000014.8:g.(?_7 4020756)_(74053119 _?)del	GRCh37 (hg19)		NC_000014.8	Chr14	74,020,756	74,053,119
nssv15613469	Submitted genomic		NC_000014.8:g.(?_7 4020756)_(74053119 _?)del	GRCh37 (hg19)		NC_000014.8	Chr14	74,020,756	74,053,119
nssv15613692	Submitted genomic		NC_000014.8:g.(?_7 4020756)_(74053119 _?)del	GRCh37 (hg19)		NC_000014.8	Chr14	74,020,756	74,053,119
nssv15624077	Submitted genomic		NC_000014.8:g.(?_7 4020756)_(74053119 _?)del	GRCh37 (hg19)		NC_000014.8	Chr14	74,020,756	74,053,119
nssv15633040	Submitted genomic		NC_000014.8:g.(?_7 4020756)_(74053119 _?)del	GRCh37 (hg19)		NC_000014.8	Chr14	74,020,756	74,053,119
nssv15633909	Submitted genomic		NC_000014.8:g.(?_7 4020756)_(74053119 _?)del	GRCh37 (hg19)		NC_000014.8	Chr14	74,020,756	74,053,119
nssv15633956	Submitted genomic		NC_000014.8:g.(?_7 4020756)_(74053119 _?)del	GRCh37 (hg19)		NC_000014.8	Chr14	74,020,756	74,053,119
nssv15655318	Submitted genomic		NC_000014.8:g.(?_7 4020756)_(74053119 _?)del	GRCh37 (hg19)		NC_000014.8	Chr14	74,020,756	74,053,119
nssv15664052	Submitted genomic		NC_000014.8:g.(?_7 4020756)_(74053119 _?)del	GRCh37 (hg19)		NC_000014.8	Chr14	74,020,756	74,053,119
nssv15684378	Submitted genomic		NC_000014.8:g.(?_7 4020756)_(74053119 _?)del	GRCh37 (hg19)		NC_000014.8	Chr14	74,020,756	74,053,119
nssv15684662	Submitted genomic		NC_000014.8:g.(?_7 4020756)_(74053119 _?)del	GRCh37 (hg19)		NC_000014.8	Chr14	74,020,756	74,053,119
nssv15690538	Submitted genomic		NC_000014.8:g.(?_7 4020756)_(74053119 _?)del	GRCh37 (hg19)		NC_000014.8	Chr14	74,020,756	74,053,119
nssv15692589	Submitted genomic		NC_000014.8:g.(?_7 4020756)_(74053119 _?)del	GRCh37 (hg19)		NC_000014.8	Chr14	74,020,756	74,053,119
nssv15698095	Submitted genomic		NC_000014.8:g.(?_7 4020756)_(74053119 _?)del	GRCh37 (hg19)		NC_000014.8	Chr14	74,020,756	74,053,119
nssv15699955	Submitted genomic		NC_000014.8:g.(?_7 4020756)_(74053119 _?)del	GRCh37 (hg19)		NC_000014.8	Chr14	74,020,756	74,053,119

dbVar

Database of genomic structural variation

nsv4382872

Links to Other Resources

Genome View

Variant Region Placement Information

Variant Call Information

Variant Call Placement Information

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant