nsv4383018
- Organism: Homo sapiens
- Study:nstd173 (Zarrei et al. 2019)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37 (hg19)
- Variant Calls:16
- Validation:Not tested
- Clinical Assertions: No
- Region Size:41,438
- Publication(s):Zarrei et al. 2019
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 468 SVs from 57 studies. See in: genome view
Overlapping variant regions from other studies: 468 SVs from 57 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4383018 | Remapped | Good | GRCh38.p12 | Primary Assembly | First Pass | NC_000003.12 | Chr3 | 8,783,660 | 8,825,097 |
| nsv4383018 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000003.11 | Chr3 | 8,825,346 | 8,866,782 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv15615212 | copy number gain | 1-0754-003 | SNP array | Genotyping | 12 |
| nssv15617328 | copy number gain | 1-0840-003 | SNP array | Genotyping | 26 |
| nssv15617349 | copy number gain | 1-0841-003 | SNP array | Genotyping | 24 |
| nssv15618457 | copy number gain | 1-0874-003 | SNP array | Genotyping | 18 |
| nssv15620022 | copy number gain | 1-0970-003 | SNP array | Genotyping | 17 |
| nssv15629405 | copy number gain | 1-0081-003 | SNP array | Genotyping | 16 |
| nssv15633123 | copy number gain | 10-1118-002 | SNP array | Genotyping | 17 |
| nssv15639329 | copy number gain | 14-0139-004 | SNP array | Genotyping | 19 |
| nssv15653501 | copy number gain | 2-1562-003 | SNP array | Genotyping | 22 |
| nssv15654166 | copy number gain | 2-1591-001 | SNP array | Genotyping | 12 |
| nssv15659723 | copy number gain | 4-0070-003 | SNP array | Genotyping | 24 |
| nssv15664986 | copy number gain | 14AG933 | SNP array | Genotyping | 17 |
| nssv15665861 | copy number gain | 7-0100-003 | SNP array | Genotyping | 16 |
| nssv15691476 | copy number gain | OCD43-B_AF-1234 | SNP array | Genotyping | 23 |
| nssv15694488 | copy number gain | OCD90-0625-2668-3 | SNP array | Genotyping | 20 |
| nssv15699923 | copy number gain | 79158 | SNP array | Genotyping | 20 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv15615212 | Remapped | Good | NC_000003.12:g.(?_ 8783660)_(8825097_ ?)dup | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 8,783,660 | 8,825,097 |
| nssv15617328 | Remapped | Good | NC_000003.12:g.(?_ 8783660)_(8825097_ ?)dup | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 8,783,660 | 8,825,097 |
| nssv15617349 | Remapped | Good | NC_000003.12:g.(?_ 8783660)_(8825097_ ?)dup | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 8,783,660 | 8,825,097 |
| nssv15618457 | Remapped | Good | NC_000003.12:g.(?_ 8783660)_(8825097_ ?)dup | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 8,783,660 | 8,825,097 |
| nssv15620022 | Remapped | Good | NC_000003.12:g.(?_ 8783660)_(8825097_ ?)dup | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 8,783,660 | 8,825,097 |
| nssv15629405 | Remapped | Good | NC_000003.12:g.(?_ 8783660)_(8825097_ ?)dup | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 8,783,660 | 8,825,097 |
| nssv15633123 | Remapped | Good | NC_000003.12:g.(?_ 8783660)_(8825097_ ?)dup | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 8,783,660 | 8,825,097 |
| nssv15639329 | Remapped | Good | NC_000003.12:g.(?_ 8783660)_(8825097_ ?)dup | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 8,783,660 | 8,825,097 |
| nssv15653501 | Remapped | Good | NC_000003.12:g.(?_ 8783660)_(8825097_ ?)dup | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 8,783,660 | 8,825,097 |
| nssv15654166 | Remapped | Good | NC_000003.12:g.(?_ 8783660)_(8825097_ ?)dup | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 8,783,660 | 8,825,097 |
| nssv15659723 | Remapped | Good | NC_000003.12:g.(?_ 8783660)_(8825097_ ?)dup | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 8,783,660 | 8,825,097 |
| nssv15664986 | Remapped | Good | NC_000003.12:g.(?_ 8783660)_(8825097_ ?)dup | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 8,783,660 | 8,825,097 |
| nssv15665861 | Remapped | Good | NC_000003.12:g.(?_ 8783660)_(8825097_ ?)dup | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 8,783,660 | 8,825,097 |
| nssv15691476 | Remapped | Good | NC_000003.12:g.(?_ 8783660)_(8825097_ ?)dup | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 8,783,660 | 8,825,097 |
| nssv15694488 | Remapped | Good | NC_000003.12:g.(?_ 8783660)_(8825097_ ?)dup | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 8,783,660 | 8,825,097 |
| nssv15699923 | Remapped | Good | NC_000003.12:g.(?_ 8783660)_(8825097_ ?)dup | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 8,783,660 | 8,825,097 |
| nssv15615212 | Submitted genomic | NC_000003.11:g.(?_ 8825346)_(8866782_ ?)dup | GRCh37 (hg19) | NC_000003.11 | Chr3 | 8,825,346 | 8,866,782 | ||
| nssv15617328 | Submitted genomic | NC_000003.11:g.(?_ 8825346)_(8866782_ ?)dup | GRCh37 (hg19) | NC_000003.11 | Chr3 | 8,825,346 | 8,866,782 | ||
| nssv15617349 | Submitted genomic | NC_000003.11:g.(?_ 8825346)_(8866782_ ?)dup | GRCh37 (hg19) | NC_000003.11 | Chr3 | 8,825,346 | 8,866,782 | ||
| nssv15618457 | Submitted genomic | NC_000003.11:g.(?_ 8825346)_(8866782_ ?)dup | GRCh37 (hg19) | NC_000003.11 | Chr3 | 8,825,346 | 8,866,782 | ||
| nssv15620022 | Submitted genomic | NC_000003.11:g.(?_ 8825346)_(8866782_ ?)dup | GRCh37 (hg19) | NC_000003.11 | Chr3 | 8,825,346 | 8,866,782 | ||
| nssv15629405 | Submitted genomic | NC_000003.11:g.(?_ 8825346)_(8866782_ ?)dup | GRCh37 (hg19) | NC_000003.11 | Chr3 | 8,825,346 | 8,866,782 | ||
| nssv15633123 | Submitted genomic | NC_000003.11:g.(?_ 8825346)_(8866782_ ?)dup | GRCh37 (hg19) | NC_000003.11 | Chr3 | 8,825,346 | 8,866,782 | ||
| nssv15639329 | Submitted genomic | NC_000003.11:g.(?_ 8825346)_(8866782_ ?)dup | GRCh37 (hg19) | NC_000003.11 | Chr3 | 8,825,346 | 8,866,782 | ||
| nssv15653501 | Submitted genomic | NC_000003.11:g.(?_ 8825346)_(8866782_ ?)dup | GRCh37 (hg19) | NC_000003.11 | Chr3 | 8,825,346 | 8,866,782 | ||
| nssv15654166 | Submitted genomic | NC_000003.11:g.(?_ 8825346)_(8866782_ ?)dup | GRCh37 (hg19) | NC_000003.11 | Chr3 | 8,825,346 | 8,866,782 | ||
| nssv15659723 | Submitted genomic | NC_000003.11:g.(?_ 8825346)_(8866782_ ?)dup | GRCh37 (hg19) | NC_000003.11 | Chr3 | 8,825,346 | 8,866,782 | ||
| nssv15664986 | Submitted genomic | NC_000003.11:g.(?_ 8825346)_(8866782_ ?)dup | GRCh37 (hg19) | NC_000003.11 | Chr3 | 8,825,346 | 8,866,782 | ||
| nssv15665861 | Submitted genomic | NC_000003.11:g.(?_ 8825346)_(8866782_ ?)dup | GRCh37 (hg19) | NC_000003.11 | Chr3 | 8,825,346 | 8,866,782 | ||
| nssv15691476 | Submitted genomic | NC_000003.11:g.(?_ 8825346)_(8866782_ ?)dup | GRCh37 (hg19) | NC_000003.11 | Chr3 | 8,825,346 | 8,866,782 | ||
| nssv15694488 | Submitted genomic | NC_000003.11:g.(?_ 8825346)_(8866782_ ?)dup | GRCh37 (hg19) | NC_000003.11 | Chr3 | 8,825,346 | 8,866,782 | ||
| nssv15699923 | Submitted genomic | NC_000003.11:g.(?_ 8825346)_(8866782_ ?)dup | GRCh37 (hg19) | NC_000003.11 | Chr3 | 8,825,346 | 8,866,782 |