nsv4383549
- Organism: Homo sapiens
- Study:nstd173 (Zarrei et al. 2019)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37 (hg19)
- Variant Calls:21
- Validation:Not tested
- Clinical Assertions: No
- Region Size:23,959
- Publication(s):Zarrei et al. 2019
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1984 SVs from 84 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Assembly | Assembly Unit | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|
| nsv4383549 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000014.8 | Chr14 | 106,536,991 | 106,560,949 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv15615022 | copy number loss | 1-0737-003 | SNP array | Genotyping | 16 |
| nssv15628422 | copy number loss | 1-0522-002 | SNP array | Genotyping | 20 |
| nssv15637329 | copy number loss | 13-0094-001 | SNP array | Genotyping | 17 |
| nssv15643262 | copy number loss | 14-0362-004 | SNP array | Genotyping | 17 |
| nssv15643444 | copy number loss | 16-1012-003 | SNP array | Genotyping | 26 |
| nssv15653037 | copy number loss | 2-1584-003 | SNP array | Genotyping | 20 |
| nssv15654390 | copy number loss | 2-1629-002 | SNP array | Genotyping | 18 |
| nssv15663159 | copy number loss | 4-0055-001 | SNP array | Genotyping | 21 |
| nssv15663581 | copy number loss | 5-1000-001 | SNP array | Genotyping | 21 |
| nssv15663916 | copy number loss | 5-0142-003 | SNP array | Genotyping | 25 |
| nssv15668684 | copy number loss | 7-0213-004 | SNP array | Genotyping | 25 |
| nssv15670979 | copy number loss | 7-0289-003 | SNP array | Genotyping | 17 |
| nssv15676519 | copy number loss | 235137S | SNP array | Genotyping | 30 |
| nssv15679977 | copy number loss | 229188S | SNP array | Genotyping | 30 |
| nssv15680174 | copy number loss | 222683 | SNP array | Genotyping | 21 |
| nssv15696595 | copy number loss | 160876 | SNP array | Genotyping | 13 |
| nssv15697873 | copy number loss | 200515 | SNP array | Genotyping | 20 |
| nssv15697964 | copy number loss | 216470 | SNP array | Genotyping | 20 |
| nssv15698852 | copy number loss | 175282 | SNP array | Genotyping | 18 |
| nssv15699386 | copy number loss | 102591 | SNP array | Genotyping | 23 |
| nssv15702497 | copy number loss | 190783 | SNP array | Genotyping | 24 |
Variant Call Placement Information
| Variant Call ID | Placement Type | HGVS | Assembly | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|
| nssv15615022 | Submitted genomic | NC_000014.8:g.(?_1 06536991)_(1065609 49_?)del | GRCh37 (hg19) | NC_000014.8 | Chr14 | 106,536,991 | 106,560,949 |
| nssv15628422 | Submitted genomic | NC_000014.8:g.(?_1 06536991)_(1065609 49_?)del | GRCh37 (hg19) | NC_000014.8 | Chr14 | 106,536,991 | 106,560,949 |
| nssv15637329 | Submitted genomic | NC_000014.8:g.(?_1 06536991)_(1065609 49_?)del | GRCh37 (hg19) | NC_000014.8 | Chr14 | 106,536,991 | 106,560,949 |
| nssv15643262 | Submitted genomic | NC_000014.8:g.(?_1 06536991)_(1065609 49_?)del | GRCh37 (hg19) | NC_000014.8 | Chr14 | 106,536,991 | 106,560,949 |
| nssv15643444 | Submitted genomic | NC_000014.8:g.(?_1 06536991)_(1065609 49_?)del | GRCh37 (hg19) | NC_000014.8 | Chr14 | 106,536,991 | 106,560,949 |
| nssv15653037 | Submitted genomic | NC_000014.8:g.(?_1 06536991)_(1065609 49_?)del | GRCh37 (hg19) | NC_000014.8 | Chr14 | 106,536,991 | 106,560,949 |
| nssv15654390 | Submitted genomic | NC_000014.8:g.(?_1 06536991)_(1065609 49_?)del | GRCh37 (hg19) | NC_000014.8 | Chr14 | 106,536,991 | 106,560,949 |
| nssv15663159 | Submitted genomic | NC_000014.8:g.(?_1 06536991)_(1065609 49_?)del | GRCh37 (hg19) | NC_000014.8 | Chr14 | 106,536,991 | 106,560,949 |
| nssv15663581 | Submitted genomic | NC_000014.8:g.(?_1 06536991)_(1065609 49_?)del | GRCh37 (hg19) | NC_000014.8 | Chr14 | 106,536,991 | 106,560,949 |
| nssv15663916 | Submitted genomic | NC_000014.8:g.(?_1 06536991)_(1065609 49_?)del | GRCh37 (hg19) | NC_000014.8 | Chr14 | 106,536,991 | 106,560,949 |
| nssv15668684 | Submitted genomic | NC_000014.8:g.(?_1 06536991)_(1065609 49_?)del | GRCh37 (hg19) | NC_000014.8 | Chr14 | 106,536,991 | 106,560,949 |
| nssv15670979 | Submitted genomic | NC_000014.8:g.(?_1 06536991)_(1065609 49_?)del | GRCh37 (hg19) | NC_000014.8 | Chr14 | 106,536,991 | 106,560,949 |
| nssv15676519 | Submitted genomic | NC_000014.8:g.(?_1 06536991)_(1065609 49_?)del | GRCh37 (hg19) | NC_000014.8 | Chr14 | 106,536,991 | 106,560,949 |
| nssv15679977 | Submitted genomic | NC_000014.8:g.(?_1 06536991)_(1065609 49_?)del | GRCh37 (hg19) | NC_000014.8 | Chr14 | 106,536,991 | 106,560,949 |
| nssv15680174 | Submitted genomic | NC_000014.8:g.(?_1 06536991)_(1065609 49_?)del | GRCh37 (hg19) | NC_000014.8 | Chr14 | 106,536,991 | 106,560,949 |
| nssv15696595 | Submitted genomic | NC_000014.8:g.(?_1 06536991)_(1065609 49_?)del | GRCh37 (hg19) | NC_000014.8 | Chr14 | 106,536,991 | 106,560,949 |
| nssv15697873 | Submitted genomic | NC_000014.8:g.(?_1 06536991)_(1065609 49_?)del | GRCh37 (hg19) | NC_000014.8 | Chr14 | 106,536,991 | 106,560,949 |
| nssv15697964 | Submitted genomic | NC_000014.8:g.(?_1 06536991)_(1065609 49_?)del | GRCh37 (hg19) | NC_000014.8 | Chr14 | 106,536,991 | 106,560,949 |
| nssv15698852 | Submitted genomic | NC_000014.8:g.(?_1 06536991)_(1065609 49_?)del | GRCh37 (hg19) | NC_000014.8 | Chr14 | 106,536,991 | 106,560,949 |
| nssv15699386 | Submitted genomic | NC_000014.8:g.(?_1 06536991)_(1065609 49_?)del | GRCh37 (hg19) | NC_000014.8 | Chr14 | 106,536,991 | 106,560,949 |
| nssv15702497 | Submitted genomic | NC_000014.8:g.(?_1 06536991)_(1065609 49_?)del | GRCh37 (hg19) | NC_000014.8 | Chr14 | 106,536,991 | 106,560,949 |