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dbVar

Database of genomic structural variation

nsv4383676

Organism: Homo sapiens

Study:nstd173 (Zarrei et al. 2019)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:3
Validation:Not tested
Clinical Assertions: No
Region Size:48,233

Publication(s):Zarrei et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 2135 SVs from 102 studies. See in: genome view

Remapped(Score: Perfect):55,606,543-55,654,775

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv4383676	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000011.10	Chr11	55,606,543	55,654,775
nsv4383676	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000011.9	Chr11	55,374,019	55,422,251

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv15619932	copy number gain	1-0942-003	SNP array	Genotyping	22
nssv15624402	copy number gain	1-0286-002	SNP array	Genotyping	18
nssv15701979	copy number gain	199597	SNP array	Genotyping	18

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15619932	Remapped	Perfect	NC_000011.10:g.(?_ 55606543)_(5565477 5_?)dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	55,606,543	55,654,775
nssv15624402	Remapped	Perfect	NC_000011.10:g.(?_ 55606543)_(5565477 5_?)dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	55,606,543	55,654,775
nssv15701979	Remapped	Perfect	NC_000011.10:g.(?_ 55606543)_(5565477 5_?)dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	55,606,543	55,654,775
nssv15619932	Submitted genomic		NC_000011.9:g.(?_5 5374019)_(55422251 _?)dup	GRCh37 (hg19)		NC_000011.9	Chr11	55,374,019	55,422,251
nssv15624402	Submitted genomic		NC_000011.9:g.(?_5 5374019)_(55422251 _?)dup	GRCh37 (hg19)		NC_000011.9	Chr11	55,374,019	55,422,251
nssv15701979	Submitted genomic		NC_000011.9:g.(?_5 5374019)_(55422251 _?)dup	GRCh37 (hg19)		NC_000011.9	Chr11	55,374,019	55,422,251

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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