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dbVar

Database of genomic structural variation

nsv4384030

Organism: Homo sapiens

Study:nstd173 (Zarrei et al. 2019)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:53,795

Publication(s):Zarrei et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 457 SVs from 38 studies. See in: genome view

Remapped(Score: Perfect):90,953,344-91,007,138

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv4384030	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000023.11	ChrX	90,953,344	91,007,138
nsv4384030	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000023.10	ChrX	90,208,343	90,262,137

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv15643731	copy number loss	2-0122-003	SNP array	Genotyping	16
nssv15646590	copy number loss	2-1269-001	SNP array	Genotyping	13

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15643731	Remapped	Perfect	NC_000023.11:g.(?_ 90953344)_(9100713 8_?)del	GRCh38.p12	First Pass	NC_000023.11	ChrX	90,953,344	91,007,138
nssv15646590	Remapped	Perfect	NC_000023.11:g.(?_ 90953344)_(9100713 8_?)del	GRCh38.p12	First Pass	NC_000023.11	ChrX	90,953,344	91,007,138
nssv15643731	Submitted genomic		NC_000023.10:g.(?_ 90208343)_(9026213 7_?)del	GRCh37 (hg19)		NC_000023.10	ChrX	90,208,343	90,262,137
nssv15646590	Submitted genomic		NC_000023.10:g.(?_ 90208343)_(9026213 7_?)del	GRCh37 (hg19)		NC_000023.10	ChrX	90,208,343	90,262,137

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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