Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv4384096

Organism: Homo sapiens

Study:nstd173 (Zarrei et al. 2019)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:3
Validation:Not tested
Clinical Assertions: No
Region Size:35,919

Publication(s):Zarrei et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 572 SVs from 62 studies. See in: genome view

Remapped(Score: Perfect):63,771,685-63,807,603

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv4384096	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000013.11	Chr13	63,771,685	63,807,603
nsv4384096	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000013.10	Chr13	64,345,818	64,381,736

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv15659978	copy number gain	5-0003-002	SNP array	Genotyping	8
nssv15661867	copy number gain	4-0042-003	SNP array	Genotyping	15
nssv15670731	copy number gain	7-0242-003	SNP array	Genotyping	18

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15659978	Remapped	Perfect	NC_000013.11:g.(?_ 63771685)_(6380760 3_?)dup	GRCh38.p12	First Pass	NC_000013.11	Chr13	63,771,685	63,807,603
nssv15661867	Remapped	Perfect	NC_000013.11:g.(?_ 63771685)_(6380760 3_?)dup	GRCh38.p12	First Pass	NC_000013.11	Chr13	63,771,685	63,807,603
nssv15670731	Remapped	Perfect	NC_000013.11:g.(?_ 63771685)_(6380760 3_?)dup	GRCh38.p12	First Pass	NC_000013.11	Chr13	63,771,685	63,807,603
nssv15659978	Submitted genomic		NC_000013.10:g.(?_ 64345818)_(6438173 6_?)dup	GRCh37 (hg19)		NC_000013.10	Chr13	64,345,818	64,381,736
nssv15661867	Submitted genomic		NC_000013.10:g.(?_ 64345818)_(6438173 6_?)dup	GRCh37 (hg19)		NC_000013.10	Chr13	64,345,818	64,381,736
nssv15670731	Submitted genomic		NC_000013.10:g.(?_ 64345818)_(6438173 6_?)dup	GRCh37 (hg19)		NC_000013.10	Chr13	64,345,818	64,381,736

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

You are here: NCBI