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dbVar

Database of genomic structural variation

nsv4384330

Organism: Homo sapiens

Study:nstd173 (Zarrei et al. 2019)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:3
Validation:Not tested
Clinical Assertions: No
Region Size:21,542

Publication(s):Zarrei et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 796 SVs from 92 studies. See in: genome view

Remapped(Score: Perfect):18,919,310-18,940,851

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv4384330	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000011.10	Chr11	18,919,310	18,940,851
nsv4384330	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000011.9	Chr11	18,940,857	18,962,398

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv15642241	copy number gain	16-1003-002	SNP array	Genotyping	24
nssv15643073	copy number gain	14-0325-002	SNP array	Genotyping	26
nssv15644176	copy number gain	16-1003-001	SNP array	Genotyping	22

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15642241	Remapped	Perfect	NC_000011.10:g.(?_ 18919310)_(1894085 1_?)dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	18,919,310	18,940,851
nssv15643073	Remapped	Perfect	NC_000011.10:g.(?_ 18919310)_(1894085 1_?)dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	18,919,310	18,940,851
nssv15644176	Remapped	Perfect	NC_000011.10:g.(?_ 18919310)_(1894085 1_?)dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	18,919,310	18,940,851
nssv15642241	Submitted genomic		NC_000011.9:g.(?_1 8940857)_(18962398 _?)dup	GRCh37 (hg19)		NC_000011.9	Chr11	18,940,857	18,962,398
nssv15643073	Submitted genomic		NC_000011.9:g.(?_1 8940857)_(18962398 _?)dup	GRCh37 (hg19)		NC_000011.9	Chr11	18,940,857	18,962,398
nssv15644176	Submitted genomic		NC_000011.9:g.(?_1 8940857)_(18962398 _?)dup	GRCh37 (hg19)		NC_000011.9	Chr11	18,940,857	18,962,398

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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