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dbVar

Database of genomic structural variation

nsv4384403

Organism: Homo sapiens

Study:nstd173 (Zarrei et al. 2019)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:27,734

Publication(s):Zarrei et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 328 SVs from 69 studies. See in: genome view

Remapped(Score: Perfect):53,178,366-53,206,099

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv4384403	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000019.10	Chr19	53,178,366	53,206,099
nsv4384403	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000019.9	Chr19	53,681,619	53,709,352

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv15644186	copy number gain	16-1003-001	SNP array	Genotyping	22
nssv15659789	copy number gain	4-0073-002	SNP array	Genotyping	24

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15644186	Remapped	Perfect	NC_000019.10:g.(?_ 53178366)_(5320609 9_?)dup	GRCh38.p12	First Pass	NC_000019.10	Chr19	53,178,366	53,206,099
nssv15659789	Remapped	Perfect	NC_000019.10:g.(?_ 53178366)_(5320609 9_?)dup	GRCh38.p12	First Pass	NC_000019.10	Chr19	53,178,366	53,206,099
nssv15644186	Submitted genomic		NC_000019.9:g.(?_5 3681619)_(53709352 _?)dup	GRCh37 (hg19)		NC_000019.9	Chr19	53,681,619	53,709,352
nssv15659789	Submitted genomic		NC_000019.9:g.(?_5 3681619)_(53709352 _?)dup	GRCh37 (hg19)		NC_000019.9	Chr19	53,681,619	53,709,352

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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