nsv4386519

Organism: Homo sapiens

Study:nstd173 (Zarrei et al. 2019)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:35
Validation:Not tested
Clinical Assertions: No
Region Size:142,231

Publication(s):Zarrei et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 1912 SVs from 91 studies. See in: genome view

Remapped(Score: Perfect):39,389,253-39,531,483

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv4386519	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000008.11	Chr8	39,389,253	39,531,483
nsv4386519	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000008.10	Chr8	39,246,772	39,389,002

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv15615012	copy number gain	1-0729-003	SNP array	Genotyping	17
nssv15616018	copy number gain	1-0139-004	SNP array	Genotyping	15
nssv15616147	copy number gain	1-0784-003	SNP array	Genotyping	19
nssv15616374	copy number gain	1-0808-003	SNP array	Genotyping	25
nssv15617240	copy number gain	1-0816-003	SNP array	Genotyping	19
nssv15625178	copy number gain	1-0389-003	SNP array	Genotyping	20
nssv15633750	copy number gain	12-4310-007	SNP array	Genotyping	16
nssv15634652	copy number gain	12-4310-004	SNP array	Genotyping	14
nssv15635309	copy number gain	12-4168-001	SNP array	Genotyping	25
nssv15635951	copy number gain	12-4264-001	SNP array	Genotyping	25
nssv15638464	copy number gain	14-0135-004	SNP array	Genotyping	33
nssv15641303	copy number gain	14-0312-003	SNP array	Genotyping	24
nssv15641973	copy number gain	15-1126-004	SNP array	Genotyping	21
nssv15642131	copy number gain	16-1001-001	SNP array	Genotyping	28
nssv15643271	copy number gain	14-0362-004	SNP array	Genotyping	17
nssv15651192	copy number loss	2-1363-002	SNP array	Genotyping	25
nssv15654303	copy number gain	2-1622-003	SNP array	Genotyping	18
nssv15656286	copy number gain	4-0001-003	SNP array	Genotyping	16
nssv15656517	copy number gain	2-1753-003	SNP array	Genotyping	19
nssv15657836	copy number gain	4-0055-003	SNP array	Genotyping	21
nssv15658108	copy number gain	3-0616-000	SNP array	Genotyping	21
nssv15660057	copy number gain	3-0636-000	SNP array	Genotyping	26
nssv15660813	copy number gain	4-0034-003	SNP array	Genotyping	30
nssv15661176	copy number gain	5-0054-001	SNP array	Genotyping	20
nssv15667455	copy number gain	5-0144-001	SNP array	Genotyping	23
nssv15668511	copy number gain	7-0224-003	SNP array	Genotyping	25
nssv15669220	copy number gain	7-0140-003	SNP array	Genotyping	24
nssv15669948	copy number gain	7-0254-003	SNP array	Genotyping	14
nssv15686685	copy number gain	OCD160-0625-4932-2	SNP array	Genotyping	23
nssv15690907	copy number gain	OCD171-RS-1772	SNP array	Genotyping	14
nssv15694750	copy number gain	217565	SNP array	Genotyping	16
nssv15695110	copy number gain	187372	SNP array	Genotyping	20
nssv15700424	copy number gain	224726	SNP array	Genotyping	22
nssv15701607	copy number gain	224728	SNP array	Genotyping	26
nssv15702725	copy number gain	207953	SNP array	Genotyping	16

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15615012	Remapped	Perfect	NC_000008.11:g.(?_ 39389253)_(3953148 3_?)dup	GRCh38.p12	First Pass	NC_000008.11	Chr8	39,389,253	39,531,483
nssv15616018	Remapped	Perfect	NC_000008.11:g.(?_ 39389253)_(3953148 3_?)dup	GRCh38.p12	First Pass	NC_000008.11	Chr8	39,389,253	39,531,483
nssv15616147	Remapped	Perfect	NC_000008.11:g.(?_ 39389253)_(3953148 3_?)dup	GRCh38.p12	First Pass	NC_000008.11	Chr8	39,389,253	39,531,483
nssv15616374	Remapped	Perfect	NC_000008.11:g.(?_ 39389253)_(3953148 3_?)dup	GRCh38.p12	First Pass	NC_000008.11	Chr8	39,389,253	39,531,483
nssv15617240	Remapped	Perfect	NC_000008.11:g.(?_ 39389253)_(3953148 3_?)dup	GRCh38.p12	First Pass	NC_000008.11	Chr8	39,389,253	39,531,483
nssv15625178	Remapped	Perfect	NC_000008.11:g.(?_ 39389253)_(3953148 3_?)dup	GRCh38.p12	First Pass	NC_000008.11	Chr8	39,389,253	39,531,483
nssv15633750	Remapped	Perfect	NC_000008.11:g.(?_ 39389253)_(3953148 3_?)dup	GRCh38.p12	First Pass	NC_000008.11	Chr8	39,389,253	39,531,483
nssv15634652	Remapped	Perfect	NC_000008.11:g.(?_ 39389253)_(3953148 3_?)dup	GRCh38.p12	First Pass	NC_000008.11	Chr8	39,389,253	39,531,483
nssv15635309	Remapped	Perfect	NC_000008.11:g.(?_ 39389253)_(3953148 3_?)dup	GRCh38.p12	First Pass	NC_000008.11	Chr8	39,389,253	39,531,483
nssv15635951	Remapped	Perfect	NC_000008.11:g.(?_ 39389253)_(3953148 3_?)dup	GRCh38.p12	First Pass	NC_000008.11	Chr8	39,389,253	39,531,483
nssv15638464	Remapped	Perfect	NC_000008.11:g.(?_ 39389253)_(3953148 3_?)dup	GRCh38.p12	First Pass	NC_000008.11	Chr8	39,389,253	39,531,483
nssv15641303	Remapped	Perfect	NC_000008.11:g.(?_ 39389253)_(3953148 3_?)dup	GRCh38.p12	First Pass	NC_000008.11	Chr8	39,389,253	39,531,483
nssv15641973	Remapped	Perfect	NC_000008.11:g.(?_ 39389253)_(3953148 3_?)dup	GRCh38.p12	First Pass	NC_000008.11	Chr8	39,389,253	39,531,483
nssv15642131	Remapped	Perfect	NC_000008.11:g.(?_ 39389253)_(3953148 3_?)dup	GRCh38.p12	First Pass	NC_000008.11	Chr8	39,389,253	39,531,483
nssv15643271	Remapped	Perfect	NC_000008.11:g.(?_ 39389253)_(3953148 3_?)dup	GRCh38.p12	First Pass	NC_000008.11	Chr8	39,389,253	39,531,483
nssv15651192	Remapped	Perfect	NC_000008.11:g.(?_ 39389253)_(3953148 3_?)del	GRCh38.p12	First Pass	NC_000008.11	Chr8	39,389,253	39,531,483
nssv15654303	Remapped	Perfect	NC_000008.11:g.(?_ 39389253)_(3953148 3_?)dup	GRCh38.p12	First Pass	NC_000008.11	Chr8	39,389,253	39,531,483
nssv15656286	Remapped	Perfect	NC_000008.11:g.(?_ 39389253)_(3953148 3_?)dup	GRCh38.p12	First Pass	NC_000008.11	Chr8	39,389,253	39,531,483
nssv15656517	Remapped	Perfect	NC_000008.11:g.(?_ 39389253)_(3953148 3_?)dup	GRCh38.p12	First Pass	NC_000008.11	Chr8	39,389,253	39,531,483
nssv15657836	Remapped	Perfect	NC_000008.11:g.(?_ 39389253)_(3953148 3_?)dup	GRCh38.p12	First Pass	NC_000008.11	Chr8	39,389,253	39,531,483
nssv15658108	Remapped	Perfect	NC_000008.11:g.(?_ 39389253)_(3953148 3_?)dup	GRCh38.p12	First Pass	NC_000008.11	Chr8	39,389,253	39,531,483
nssv15660057	Remapped	Perfect	NC_000008.11:g.(?_ 39389253)_(3953148 3_?)dup	GRCh38.p12	First Pass	NC_000008.11	Chr8	39,389,253	39,531,483
nssv15660813	Remapped	Perfect	NC_000008.11:g.(?_ 39389253)_(3953148 3_?)dup	GRCh38.p12	First Pass	NC_000008.11	Chr8	39,389,253	39,531,483
nssv15661176	Remapped	Perfect	NC_000008.11:g.(?_ 39389253)_(3953148 3_?)dup	GRCh38.p12	First Pass	NC_000008.11	Chr8	39,389,253	39,531,483
nssv15667455	Remapped	Perfect	NC_000008.11:g.(?_ 39389253)_(3953148 3_?)dup	GRCh38.p12	First Pass	NC_000008.11	Chr8	39,389,253	39,531,483
nssv15668511	Remapped	Perfect	NC_000008.11:g.(?_ 39389253)_(3953148 3_?)dup	GRCh38.p12	First Pass	NC_000008.11	Chr8	39,389,253	39,531,483
nssv15669220	Remapped	Perfect	NC_000008.11:g.(?_ 39389253)_(3953148 3_?)dup	GRCh38.p12	First Pass	NC_000008.11	Chr8	39,389,253	39,531,483
nssv15669948	Remapped	Perfect	NC_000008.11:g.(?_ 39389253)_(3953148 3_?)dup	GRCh38.p12	First Pass	NC_000008.11	Chr8	39,389,253	39,531,483
nssv15686685	Remapped	Perfect	NC_000008.11:g.(?_ 39389253)_(3953148 3_?)dup	GRCh38.p12	First Pass	NC_000008.11	Chr8	39,389,253	39,531,483
nssv15690907	Remapped	Perfect	NC_000008.11:g.(?_ 39389253)_(3953148 3_?)dup	GRCh38.p12	First Pass	NC_000008.11	Chr8	39,389,253	39,531,483
nssv15694750	Remapped	Perfect	NC_000008.11:g.(?_ 39389253)_(3953148 3_?)dup	GRCh38.p12	First Pass	NC_000008.11	Chr8	39,389,253	39,531,483
nssv15695110	Remapped	Perfect	NC_000008.11:g.(?_ 39389253)_(3953148 3_?)dup	GRCh38.p12	First Pass	NC_000008.11	Chr8	39,389,253	39,531,483
nssv15700424	Remapped	Perfect	NC_000008.11:g.(?_ 39389253)_(3953148 3_?)dup	GRCh38.p12	First Pass	NC_000008.11	Chr8	39,389,253	39,531,483
nssv15701607	Remapped	Perfect	NC_000008.11:g.(?_ 39389253)_(3953148 3_?)dup	GRCh38.p12	First Pass	NC_000008.11	Chr8	39,389,253	39,531,483
nssv15702725	Remapped	Perfect	NC_000008.11:g.(?_ 39389253)_(3953148 3_?)dup	GRCh38.p12	First Pass	NC_000008.11	Chr8	39,389,253	39,531,483
nssv15615012	Submitted genomic		NC_000008.10:g.(?_ 39246772)_(3938900 2_?)dup	GRCh37 (hg19)		NC_000008.10	Chr8	39,246,772	39,389,002
nssv15616018	Submitted genomic		NC_000008.10:g.(?_ 39246772)_(3938900 2_?)dup	GRCh37 (hg19)		NC_000008.10	Chr8	39,246,772	39,389,002
nssv15616147	Submitted genomic		NC_000008.10:g.(?_ 39246772)_(3938900 2_?)dup	GRCh37 (hg19)		NC_000008.10	Chr8	39,246,772	39,389,002
nssv15616374	Submitted genomic		NC_000008.10:g.(?_ 39246772)_(3938900 2_?)dup	GRCh37 (hg19)		NC_000008.10	Chr8	39,246,772	39,389,002
nssv15617240	Submitted genomic		NC_000008.10:g.(?_ 39246772)_(3938900 2_?)dup	GRCh37 (hg19)		NC_000008.10	Chr8	39,246,772	39,389,002
nssv15625178	Submitted genomic		NC_000008.10:g.(?_ 39246772)_(3938900 2_?)dup	GRCh37 (hg19)		NC_000008.10	Chr8	39,246,772	39,389,002
nssv15633750	Submitted genomic		NC_000008.10:g.(?_ 39246772)_(3938900 2_?)dup	GRCh37 (hg19)		NC_000008.10	Chr8	39,246,772	39,389,002
nssv15634652	Submitted genomic		NC_000008.10:g.(?_ 39246772)_(3938900 2_?)dup	GRCh37 (hg19)		NC_000008.10	Chr8	39,246,772	39,389,002
nssv15635309	Submitted genomic		NC_000008.10:g.(?_ 39246772)_(3938900 2_?)dup	GRCh37 (hg19)		NC_000008.10	Chr8	39,246,772	39,389,002
nssv15635951	Submitted genomic		NC_000008.10:g.(?_ 39246772)_(3938900 2_?)dup	GRCh37 (hg19)		NC_000008.10	Chr8	39,246,772	39,389,002
nssv15638464	Submitted genomic		NC_000008.10:g.(?_ 39246772)_(3938900 2_?)dup	GRCh37 (hg19)		NC_000008.10	Chr8	39,246,772	39,389,002
nssv15641303	Submitted genomic		NC_000008.10:g.(?_ 39246772)_(3938900 2_?)dup	GRCh37 (hg19)		NC_000008.10	Chr8	39,246,772	39,389,002
nssv15641973	Submitted genomic		NC_000008.10:g.(?_ 39246772)_(3938900 2_?)dup	GRCh37 (hg19)		NC_000008.10	Chr8	39,246,772	39,389,002
nssv15642131	Submitted genomic		NC_000008.10:g.(?_ 39246772)_(3938900 2_?)dup	GRCh37 (hg19)		NC_000008.10	Chr8	39,246,772	39,389,002
nssv15643271	Submitted genomic		NC_000008.10:g.(?_ 39246772)_(3938900 2_?)dup	GRCh37 (hg19)		NC_000008.10	Chr8	39,246,772	39,389,002
nssv15651192	Submitted genomic		NC_000008.10:g.(?_ 39246772)_(3938900 2_?)del	GRCh37 (hg19)		NC_000008.10	Chr8	39,246,772	39,389,002
nssv15654303	Submitted genomic		NC_000008.10:g.(?_ 39246772)_(3938900 2_?)dup	GRCh37 (hg19)		NC_000008.10	Chr8	39,246,772	39,389,002
nssv15656286	Submitted genomic		NC_000008.10:g.(?_ 39246772)_(3938900 2_?)dup	GRCh37 (hg19)		NC_000008.10	Chr8	39,246,772	39,389,002
nssv15656517	Submitted genomic		NC_000008.10:g.(?_ 39246772)_(3938900 2_?)dup	GRCh37 (hg19)		NC_000008.10	Chr8	39,246,772	39,389,002
nssv15657836	Submitted genomic		NC_000008.10:g.(?_ 39246772)_(3938900 2_?)dup	GRCh37 (hg19)		NC_000008.10	Chr8	39,246,772	39,389,002
nssv15658108	Submitted genomic		NC_000008.10:g.(?_ 39246772)_(3938900 2_?)dup	GRCh37 (hg19)		NC_000008.10	Chr8	39,246,772	39,389,002
nssv15660057	Submitted genomic		NC_000008.10:g.(?_ 39246772)_(3938900 2_?)dup	GRCh37 (hg19)		NC_000008.10	Chr8	39,246,772	39,389,002
nssv15660813	Submitted genomic		NC_000008.10:g.(?_ 39246772)_(3938900 2_?)dup	GRCh37 (hg19)		NC_000008.10	Chr8	39,246,772	39,389,002
nssv15661176	Submitted genomic		NC_000008.10:g.(?_ 39246772)_(3938900 2_?)dup	GRCh37 (hg19)		NC_000008.10	Chr8	39,246,772	39,389,002
nssv15667455	Submitted genomic		NC_000008.10:g.(?_ 39246772)_(3938900 2_?)dup	GRCh37 (hg19)		NC_000008.10	Chr8	39,246,772	39,389,002
nssv15668511	Submitted genomic		NC_000008.10:g.(?_ 39246772)_(3938900 2_?)dup	GRCh37 (hg19)		NC_000008.10	Chr8	39,246,772	39,389,002
nssv15669220	Submitted genomic		NC_000008.10:g.(?_ 39246772)_(3938900 2_?)dup	GRCh37 (hg19)		NC_000008.10	Chr8	39,246,772	39,389,002
nssv15669948	Submitted genomic		NC_000008.10:g.(?_ 39246772)_(3938900 2_?)dup	GRCh37 (hg19)		NC_000008.10	Chr8	39,246,772	39,389,002
nssv15686685	Submitted genomic		NC_000008.10:g.(?_ 39246772)_(3938900 2_?)dup	GRCh37 (hg19)		NC_000008.10	Chr8	39,246,772	39,389,002
nssv15690907	Submitted genomic		NC_000008.10:g.(?_ 39246772)_(3938900 2_?)dup	GRCh37 (hg19)		NC_000008.10	Chr8	39,246,772	39,389,002
nssv15694750	Submitted genomic		NC_000008.10:g.(?_ 39246772)_(3938900 2_?)dup	GRCh37 (hg19)		NC_000008.10	Chr8	39,246,772	39,389,002
nssv15695110	Submitted genomic		NC_000008.10:g.(?_ 39246772)_(3938900 2_?)dup	GRCh37 (hg19)		NC_000008.10	Chr8	39,246,772	39,389,002
nssv15700424	Submitted genomic		NC_000008.10:g.(?_ 39246772)_(3938900 2_?)dup	GRCh37 (hg19)		NC_000008.10	Chr8	39,246,772	39,389,002
nssv15701607	Submitted genomic		NC_000008.10:g.(?_ 39246772)_(3938900 2_?)dup	GRCh37 (hg19)		NC_000008.10	Chr8	39,246,772	39,389,002
nssv15702725	Submitted genomic		NC_000008.10:g.(?_ 39246772)_(3938900 2_?)dup	GRCh37 (hg19)		NC_000008.10	Chr8	39,246,772	39,389,002

dbVar

Database of genomic structural variation

nsv4386519

Links to Other Resources

Genome View

Variant Region Placement Information

Variant Call Information

Variant Call Placement Information

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant