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dbVar

Database of genomic structural variation

nsv4386644

Organism: Homo sapiens

Study:nstd173 (Zarrei et al. 2019)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:22,138

Publication(s):Zarrei et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 523 SVs from 78 studies. See in: genome view

Remapped(Score: Perfect):128,658,228-128,680,365

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv4386644	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000003.12	Chr3	128,658,228	128,680,365
nsv4386644	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000003.11	Chr3	128,377,071	128,399,208

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv15668339	copy number loss	7-0190-003	SNP array	Genotyping	21
nssv15695849	copy number loss	212972	SNP array	Genotyping	20

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15668339	Remapped	Perfect	NC_000003.12:g.(?_ 128658228)_(128680 365_?)del	GRCh38.p12	First Pass	NC_000003.12	Chr3	128,658,228	128,680,365
nssv15695849	Remapped	Perfect	NC_000003.12:g.(?_ 128658228)_(128680 365_?)del	GRCh38.p12	First Pass	NC_000003.12	Chr3	128,658,228	128,680,365
nssv15668339	Submitted genomic		NC_000003.11:g.(?_ 128377071)_(128399 208_?)del	GRCh37 (hg19)		NC_000003.11	Chr3	128,377,071	128,399,208
nssv15695849	Submitted genomic		NC_000003.11:g.(?_ 128377071)_(128399 208_?)del	GRCh37 (hg19)		NC_000003.11	Chr3	128,377,071	128,399,208

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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