nsv4388173
- Organism: Homo sapiens
- Study:nstd173 (Zarrei et al. 2019)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1,534,256
- Publication(s):Zarrei et al. 2019
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 7529 SVs from 112 studies. See in: genome view
Overlapping variant regions from other studies: 7599 SVs from 112 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4388173 | Remapped | Pass | GRCh38.p12 | Primary Assembly | First Pass | NC_000016.10 | Chr16 | 32,526,950 | 34,061,205 |
| nsv4388173 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000016.9 | Chr16 | 32,538,271 | 33,863,672 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv15645518 | copy number loss | 2-0299-003 | SNP array | Genotyping | 23 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv15645518 | Remapped | Pass | NC_000016.10:g.(?_ 32526950)_(3406120 5_?)del | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 32,526,950 | 34,061,205 |
| nssv15645518 | Submitted genomic | NC_000016.9:g.(?_3 2538271)_(33863672 _?)del | GRCh37 (hg19) | NC_000016.9 | Chr16 | 32,538,271 | 33,863,672 |