nsv4388201
- Organism: Homo sapiens
- Study:nstd173 (Zarrei et al. 2019)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37 (hg19)
- Variant Calls:18
- Validation:Not tested
- Clinical Assertions: No
- Region Size:142,245
- Publication(s):Zarrei et al. 2019
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1912 SVs from 91 studies. See in: genome view
Overlapping variant regions from other studies: 1912 SVs from 91 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4388201 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000008.11 | Chr8 | 39,389,253 | 39,531,497 |
| nsv4388201 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000008.10 | Chr8 | 39,246,772 | 39,389,016 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv15614398 | copy number gain | 1-0761-003 | SNP array | Genotyping | 20 |
| nssv15616843 | copy number gain | 1-0809-003 | SNP array | Genotyping | 33 |
| nssv15619946 | copy number gain | 1-0947-003 | SNP array | Genotyping | 22 |
| nssv15620584 | copy number gain | 1-0950-003 | SNP array | Genotyping | 27 |
| nssv15627379 | copy number gain | 1-0539-001 | SNP array | Genotyping | 29 |
| nssv15629423 | copy number gain | 1-0555-004 | SNP array | Genotyping | 18 |
| nssv15634990 | copy number gain | 12-4425-005 | SNP array | Genotyping | 24 |
| nssv15635516 | copy number gain | 12-4453-003 | SNP array | Genotyping | 20 |
| nssv15636030 | copy number gain | 13-0095-004 | SNP array | Genotyping | 24 |
| nssv15636962 | copy number gain | 14-0020-002 | SNP array | Genotyping | 28 |
| nssv15638984 | copy number gain | 14-0185-002 | SNP array | Genotyping | 24 |
| nssv15640179 | copy number gain | 14-0119-002 | SNP array | Genotyping | 22 |
| nssv15643504 | copy number gain | 16-1013-001 | SNP array | Genotyping | 25 |
| nssv15645486 | copy number gain | 2-0299-001 | SNP array | Genotyping | 16 |
| nssv15652704 | copy number gain | 2-1508-004 | SNP array | Genotyping | 24 |
| nssv15656245 | copy number gain | 3-0710-000 | SNP array | Genotyping | 15 |
| nssv15675442 | copy number gain | 213048 | SNP array | Genotyping | 21 |
| nssv15702589 | copy number gain | 237508 | SNP array | Genotyping | 39 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv15614398 | Remapped | Perfect | NC_000008.11:g.(?_ 39389253)_(3953149 7_?)dup | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 39,389,253 | 39,531,497 |
| nssv15616843 | Remapped | Perfect | NC_000008.11:g.(?_ 39389253)_(3953149 7_?)dup | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 39,389,253 | 39,531,497 |
| nssv15619946 | Remapped | Perfect | NC_000008.11:g.(?_ 39389253)_(3953149 7_?)dup | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 39,389,253 | 39,531,497 |
| nssv15620584 | Remapped | Perfect | NC_000008.11:g.(?_ 39389253)_(3953149 7_?)dup | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 39,389,253 | 39,531,497 |
| nssv15627379 | Remapped | Perfect | NC_000008.11:g.(?_ 39389253)_(3953149 7_?)dup | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 39,389,253 | 39,531,497 |
| nssv15629423 | Remapped | Perfect | NC_000008.11:g.(?_ 39389253)_(3953149 7_?)dup | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 39,389,253 | 39,531,497 |
| nssv15634990 | Remapped | Perfect | NC_000008.11:g.(?_ 39389253)_(3953149 7_?)dup | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 39,389,253 | 39,531,497 |
| nssv15635516 | Remapped | Perfect | NC_000008.11:g.(?_ 39389253)_(3953149 7_?)dup | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 39,389,253 | 39,531,497 |
| nssv15636030 | Remapped | Perfect | NC_000008.11:g.(?_ 39389253)_(3953149 7_?)dup | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 39,389,253 | 39,531,497 |
| nssv15636962 | Remapped | Perfect | NC_000008.11:g.(?_ 39389253)_(3953149 7_?)dup | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 39,389,253 | 39,531,497 |
| nssv15638984 | Remapped | Perfect | NC_000008.11:g.(?_ 39389253)_(3953149 7_?)dup | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 39,389,253 | 39,531,497 |
| nssv15640179 | Remapped | Perfect | NC_000008.11:g.(?_ 39389253)_(3953149 7_?)dup | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 39,389,253 | 39,531,497 |
| nssv15643504 | Remapped | Perfect | NC_000008.11:g.(?_ 39389253)_(3953149 7_?)dup | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 39,389,253 | 39,531,497 |
| nssv15645486 | Remapped | Perfect | NC_000008.11:g.(?_ 39389253)_(3953149 7_?)dup | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 39,389,253 | 39,531,497 |
| nssv15652704 | Remapped | Perfect | NC_000008.11:g.(?_ 39389253)_(3953149 7_?)dup | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 39,389,253 | 39,531,497 |
| nssv15656245 | Remapped | Perfect | NC_000008.11:g.(?_ 39389253)_(3953149 7_?)dup | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 39,389,253 | 39,531,497 |
| nssv15675442 | Remapped | Perfect | NC_000008.11:g.(?_ 39389253)_(3953149 7_?)dup | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 39,389,253 | 39,531,497 |
| nssv15702589 | Remapped | Perfect | NC_000008.11:g.(?_ 39389253)_(3953149 7_?)dup | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 39,389,253 | 39,531,497 |
| nssv15614398 | Submitted genomic | NC_000008.10:g.(?_ 39246772)_(3938901 6_?)dup | GRCh37 (hg19) | NC_000008.10 | Chr8 | 39,246,772 | 39,389,016 | ||
| nssv15616843 | Submitted genomic | NC_000008.10:g.(?_ 39246772)_(3938901 6_?)dup | GRCh37 (hg19) | NC_000008.10 | Chr8 | 39,246,772 | 39,389,016 | ||
| nssv15619946 | Submitted genomic | NC_000008.10:g.(?_ 39246772)_(3938901 6_?)dup | GRCh37 (hg19) | NC_000008.10 | Chr8 | 39,246,772 | 39,389,016 | ||
| nssv15620584 | Submitted genomic | NC_000008.10:g.(?_ 39246772)_(3938901 6_?)dup | GRCh37 (hg19) | NC_000008.10 | Chr8 | 39,246,772 | 39,389,016 | ||
| nssv15627379 | Submitted genomic | NC_000008.10:g.(?_ 39246772)_(3938901 6_?)dup | GRCh37 (hg19) | NC_000008.10 | Chr8 | 39,246,772 | 39,389,016 | ||
| nssv15629423 | Submitted genomic | NC_000008.10:g.(?_ 39246772)_(3938901 6_?)dup | GRCh37 (hg19) | NC_000008.10 | Chr8 | 39,246,772 | 39,389,016 | ||
| nssv15634990 | Submitted genomic | NC_000008.10:g.(?_ 39246772)_(3938901 6_?)dup | GRCh37 (hg19) | NC_000008.10 | Chr8 | 39,246,772 | 39,389,016 | ||
| nssv15635516 | Submitted genomic | NC_000008.10:g.(?_ 39246772)_(3938901 6_?)dup | GRCh37 (hg19) | NC_000008.10 | Chr8 | 39,246,772 | 39,389,016 | ||
| nssv15636030 | Submitted genomic | NC_000008.10:g.(?_ 39246772)_(3938901 6_?)dup | GRCh37 (hg19) | NC_000008.10 | Chr8 | 39,246,772 | 39,389,016 | ||
| nssv15636962 | Submitted genomic | NC_000008.10:g.(?_ 39246772)_(3938901 6_?)dup | GRCh37 (hg19) | NC_000008.10 | Chr8 | 39,246,772 | 39,389,016 | ||
| nssv15638984 | Submitted genomic | NC_000008.10:g.(?_ 39246772)_(3938901 6_?)dup | GRCh37 (hg19) | NC_000008.10 | Chr8 | 39,246,772 | 39,389,016 | ||
| nssv15640179 | Submitted genomic | NC_000008.10:g.(?_ 39246772)_(3938901 6_?)dup | GRCh37 (hg19) | NC_000008.10 | Chr8 | 39,246,772 | 39,389,016 | ||
| nssv15643504 | Submitted genomic | NC_000008.10:g.(?_ 39246772)_(3938901 6_?)dup | GRCh37 (hg19) | NC_000008.10 | Chr8 | 39,246,772 | 39,389,016 | ||
| nssv15645486 | Submitted genomic | NC_000008.10:g.(?_ 39246772)_(3938901 6_?)dup | GRCh37 (hg19) | NC_000008.10 | Chr8 | 39,246,772 | 39,389,016 | ||
| nssv15652704 | Submitted genomic | NC_000008.10:g.(?_ 39246772)_(3938901 6_?)dup | GRCh37 (hg19) | NC_000008.10 | Chr8 | 39,246,772 | 39,389,016 | ||
| nssv15656245 | Submitted genomic | NC_000008.10:g.(?_ 39246772)_(3938901 6_?)dup | GRCh37 (hg19) | NC_000008.10 | Chr8 | 39,246,772 | 39,389,016 | ||
| nssv15675442 | Submitted genomic | NC_000008.10:g.(?_ 39246772)_(3938901 6_?)dup | GRCh37 (hg19) | NC_000008.10 | Chr8 | 39,246,772 | 39,389,016 | ||
| nssv15702589 | Submitted genomic | NC_000008.10:g.(?_ 39246772)_(3938901 6_?)dup | GRCh37 (hg19) | NC_000008.10 | Chr8 | 39,246,772 | 39,389,016 |