nsv44
- Organism: Homo sapiens
- Study:nstd1 (Tuzun et al. 2005)
- Variant Type:insertion
- Method Type:Sequencing
- Submitted on:NCBI35 (hg17)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:17,908
- Publication(s):Tuzun et al. 2005
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 212 SVs from 41 studies. See in: genome view
Overlapping variant regions from other studies: 212 SVs from 41 studies. See in: genome view
Overlapping variant regions from other studies: 20 SVs from 5 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv44 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000009.12 | Chr9 | 104,867,939 | 104,885,846 |
| nsv44 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000009.11 | Chr9 | 107,630,220 | 107,648,127 |
| nsv44 | Submitted genomic | NCBI35 (hg17) | Primary Assembly | NC_000009.9 | Chr9 | 104,709,775 | 104,727,682 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv44 | insertion | SAMN00000376 | Sequencing | Paired-end mapping | 297 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv44 | Remapped | Perfect | NC_000009.12:g.(10 4867939_?)_(?_1048 85846)ins10789 | GRCh38.p12 | First Pass | NC_000009.12 | Chr9 | 104,867,939 | 104,885,846 |
| nssv44 | Remapped | Perfect | NC_000009.11:g.(10 7630220_?)_(?_1076 48127)ins10789 | GRCh37.p13 | First Pass | NC_000009.11 | Chr9 | 107,630,220 | 107,648,127 |
| nssv44 | Submitted genomic | NC_000009.9:g.(104 709775_?)_(?_10472 7682)ins10789 | NCBI35 (hg17) | NC_000009.9 | Chr9 | 104,709,775 | 104,727,682 |