nsv4431138
- Organism: Homo sapiens
- Study:nstd161 (Nazaryan-Petersen et al. 2019)
- Variant Type:complex chromosomal rearrangement
- Method Type:Sequencing
- Submitted on:GRCh37 (hg19)
- Variant Calls:6
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1
- Publication(s):Nazaryan-Petersen et al. 2019
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 108 SVs from 22 studies. See in: genome view
Overlapping variant regions from other studies: 130 SVs from 31 studies. See in: genome view
Overlapping variant regions from other studies: 159 SVs from 24 studies. See in: genome view
Overlapping variant regions from other studies: 417 SVs from 67 studies. See in: genome view
Overlapping variant regions from other studies: 169 SVs from 26 studies. See in: genome view
Overlapping variant regions from other studies: 113 SVs from 29 studies. See in: genome view
Overlapping variant regions from other studies: 206 SVs from 21 studies. See in: genome view
Overlapping variant regions from other studies: 256 SVs from 35 studies. See in: genome view
Overlapping variant regions from other studies: 260 SVs from 36 studies. See in: genome view
Overlapping variant regions from other studies: 235 SVs from 22 studies. See in: genome view
Overlapping variant regions from other studies: 235 SVs from 22 studies. See in: genome view
Overlapping variant regions from other studies: 243 SVs from 25 studies. See in: genome view
Overlapping variant regions from other studies: 108 SVs from 22 studies. See in: genome view
Overlapping variant regions from other studies: 130 SVs from 31 studies. See in: genome view
Overlapping variant regions from other studies: 159 SVs from 24 studies. See in: genome view
Overlapping variant regions from other studies: 417 SVs from 67 studies. See in: genome view
Overlapping variant regions from other studies: 169 SVs from 26 studies. See in: genome view
Overlapping variant regions from other studies: 113 SVs from 29 studies. See in: genome view
Overlapping variant regions from other studies: 206 SVs from 21 studies. See in: genome view
Overlapping variant regions from other studies: 256 SVs from 35 studies. See in: genome view
Overlapping variant regions from other studies: 260 SVs from 36 studies. See in: genome view
Overlapping variant regions from other studies: 235 SVs from 22 studies. See in: genome view
Overlapping variant regions from other studies: 235 SVs from 22 studies. See in: genome view
Overlapping variant regions from other studies: 243 SVs from 25 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop | strand |
---|---|---|---|---|---|---|---|---|---|---|
nsv4431138 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000007.14 | Chr7 | 106,878,541 | 106,878,541 | - |
nsv4431138 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000007.14 | Chr7 | 120,131,588 | 120,131,588 | - |
nsv4431138 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000007.14 | Chr7 | 143,373,781 | 143,373,781 | - |
nsv4431138 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000007.14 | Chr7 | 143,845,117 | 143,845,117 | - |
nsv4431138 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000007.14 | Chr7 | 145,141,408 | 145,141,408 | - |
nsv4431138 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000007.14 | Chr7 | 94,354,241 | 94,354,241 | - |
nsv4431138 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000008.11 | Chr8 | 113,632,611 | 113,632,611 | + |
nsv4431138 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000008.11 | Chr8 | 114,153,921 | 114,153,921 | + |
nsv4431138 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000008.11 | Chr8 | 114,309,798 | 114,309,798 | + |
nsv4431138 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000008.11 | Chr8 | 114,517,074 | 114,517,074 | + |
nsv4431138 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000008.11 | Chr8 | 114,517,076 | 114,517,076 | + |
nsv4431138 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000013.11 | Chr13 | 62,627,747 | 62,627,747 | + |
nsv4431138 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000007.13 | Chr7 | 106,518,986 | 106,518,986 | - | ||
nsv4431138 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000007.13 | Chr7 | 119,771,642 | 119,771,642 | - | ||
nsv4431138 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000007.13 | Chr7 | 143,070,874 | 143,070,874 | - | ||
nsv4431138 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000007.13 | Chr7 | 143,542,210 | 143,542,210 | - | ||
nsv4431138 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000007.13 | Chr7 | 144,838,501 | 144,838,501 | - | ||
nsv4431138 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000007.13 | Chr7 | 93,983,553 | 93,983,553 | - | ||
nsv4431138 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000008.10 | Chr8 | 114,644,840 | 114,644,840 | + | ||
nsv4431138 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000008.10 | Chr8 | 115,166,150 | 115,166,150 | + | ||
nsv4431138 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000008.10 | Chr8 | 115,322,027 | 115,322,027 | + | ||
nsv4431138 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000008.10 | Chr8 | 115,529,303 | 115,529,303 | + | ||
nsv4431138 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000008.10 | Chr8 | 115,529,305 | 115,529,305 | + | ||
nsv4431138 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000013.10 | Chr13 | 63,201,880 | 63,201,880 | + |
Variant Call Information
Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
---|---|---|---|---|---|
nssv15745548 | intrachromosomal translocation | D15358 | Sequencing | Paired-end mapping, Sequence alignment | 41 |
nssv15745544 | interchromosomal translocation | D15358 | Sequencing | Paired-end mapping, Sequence alignment | 41 |
nssv15745550 | interchromosomal translocation | D15358 | Sequencing | Paired-end mapping, Sequence alignment | 41 |
nssv15745549 | intrachromosomal translocation | D15358 | Sequencing | Paired-end mapping, Sequence alignment | 41 |
nssv15745551 | intrachromosomal translocation | D15358 | Sequencing | Paired-end mapping, Sequence alignment | 41 |
nssv15745552 | intrachromosomal translocation | D15358 | Sequencing | Paired-end mapping, Sequence alignment | 41 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop | strand |
---|---|---|---|---|---|---|---|---|---|
nssv15745548 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 94,354,241 | 94,354,241 | - |
nssv15745544 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 106,878,541 | 106,878,541 | - |
nssv15745550 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 120,131,588 | 120,131,588 | - |
nssv15745549 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 143,373,781 | 143,373,781 | - |
nssv15745549 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 143,845,117 | 143,845,117 | - |
nssv15745548 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 145,141,408 | 145,141,408 | - |
nssv15745551 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 113,632,611 | 113,632,611 | + |
nssv15745552 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 114,153,921 | 114,153,921 | + |
nssv15745550 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 114,309,798 | 114,309,798 | + |
nssv15745552 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 114,517,074 | 114,517,074 | + |
nssv15745551 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 114,517,076 | 114,517,076 | + |
nssv15745544 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000013.11 | Chr13 | 62,627,747 | 62,627,747 | + |
nssv15745548 | Submitted genomic | GRCh37 (hg19) | NC_000007.13 | Chr7 | 93,983,553 | 93,983,553 | - | ||
nssv15745544 | Submitted genomic | GRCh37 (hg19) | NC_000007.13 | Chr7 | 106,518,986 | 106,518,986 | - | ||
nssv15745550 | Submitted genomic | GRCh37 (hg19) | NC_000007.13 | Chr7 | 119,771,642 | 119,771,642 | - | ||
nssv15745549 | Submitted genomic | GRCh37 (hg19) | NC_000007.13 | Chr7 | 143,070,874 | 143,070,874 | - | ||
nssv15745549 | Submitted genomic | GRCh37 (hg19) | NC_000007.13 | Chr7 | 143,542,210 | 143,542,210 | - | ||
nssv15745548 | Submitted genomic | GRCh37 (hg19) | NC_000007.13 | Chr7 | 144,838,501 | 144,838,501 | - | ||
nssv15745551 | Submitted genomic | GRCh37 (hg19) | NC_000008.10 | Chr8 | 114,644,840 | 114,644,840 | + | ||
nssv15745552 | Submitted genomic | GRCh37 (hg19) | NC_000008.10 | Chr8 | 115,166,150 | 115,166,150 | + | ||
nssv15745550 | Submitted genomic | GRCh37 (hg19) | NC_000008.10 | Chr8 | 115,322,027 | 115,322,027 | + | ||
nssv15745552 | Submitted genomic | GRCh37 (hg19) | NC_000008.10 | Chr8 | 115,529,303 | 115,529,303 | + | ||
nssv15745551 | Submitted genomic | GRCh37 (hg19) | NC_000008.10 | Chr8 | 115,529,305 | 115,529,305 | + | ||
nssv15745544 | Submitted genomic | GRCh37 (hg19) | NC_000013.10 | Chr13 | 63,201,880 | 63,201,880 | + |