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dbVar

Database of genomic structural variation

nsv4435026

Organism: Homo sapiens

Study:nstd172 (Deng et al. 2019)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh37 (hg19)

Variant Calls:3
Validation:Not tested
Clinical Assertions: No
Region Size:69,288

Publication(s):Deng et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 2620 SVs from 97 studies. See in: genome view

Remapped(Score: Perfect):78,257,471-78,326,758

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv4435026	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000006.12	Chr6	78,257,471	78,326,758
nsv4435026	Submitted genomic		GRCh37.p13	Primary Assembly		NC_000006.11	Chr6	78,967,188	79,036,475

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv15752128	deletion	MDQ010	Sequencing	Sequence alignment	777
nssv15752231	deletion	BTQ055	Sequencing	Sequence alignment	565
nssv15752353	deletion	BTQ038	Sequencing	Sequence alignment	561

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv15752128	Remapped	Perfect	NC_000006.12:g.782 57471_78326758del	GRCh38.p12	First Pass	NC_000006.12	Chr6	78,257,471	78,326,758
nssv15752231	Remapped	Perfect	NC_000006.12:g.782 57471_78326758del	GRCh38.p12	First Pass	NC_000006.12	Chr6	78,257,471	78,326,758
nssv15752353	Remapped	Perfect	NC_000006.12:g.782 57471_78326758del	GRCh38.p12	First Pass	NC_000006.12	Chr6	78,257,471	78,326,758
nssv15752128	Submitted genomic		NC_000006.11:g.789 67188_79036475del	GRCh37.p13		NC_000006.11	Chr6	78,967,188	79,036,475
nssv15752231	Submitted genomic		NC_000006.11:g.789 67188_79036475del	GRCh37.p13		NC_000006.11	Chr6	78,967,188	79,036,475
nssv15752353	Submitted genomic		NC_000006.11:g.789 67188_79036475del	GRCh37.p13		NC_000006.11	Chr6	78,967,188	79,036,475

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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