nsv4436231
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:complex substitution
- Method Type:Multiple
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:28,429
- Description:chr20:61880169-61908597 complex variant AND Ductal breast carcinoma
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 253 SVs from 57 studies. See in: genome view
Overlapping variant regions from other studies: 253 SVs from 57 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4436231 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000020.11 | Chr20 | 63,248,817 | 63,277,245 |
| nsv4436231 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000020.10 | Chr20 | 61,880,169 | 61,908,597 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID |
|---|---|---|---|---|---|---|---|
| nssv15754742 | complex substitution | Multiple | Multiple | Ductal breast carcinoma | Uncertain significance | ClinVar | RCV000207048.1, VCV000221371.1 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|
| nssv15754742 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000020.11 | Chr20 | 63,248,817 | 63,277,245 |
| nssv15754742 | Submitted genomic | GRCh37 (hg19) | NC_000020.10 | Chr20 | 61,880,169 | 61,908,597 |
No validation data were submitted for this variant
Clinical Assertions
| Variant Call ID | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID |
|---|---|---|---|---|---|---|
| nssv15754742 | complex substitution | somatic | Ductal breast carcinoma | Uncertain significance | ClinVar | RCV000207048.1, VCV000221371.1 |