nsv4436748
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:copy number variation
- Method Type:Multiple
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:14,357,895
- Description:GRCh37/hg19 11q23.3-25(chr11:120576984-134934063)x1 AND See cases
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 37727 SVs from 126 studies. See in: genome view
Overlapping variant regions from other studies: 37731 SVs from 127 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4436748 | Remapped | Good | GRCh38.p12 | Primary Assembly | First Pass | NC_000011.10 | Chr11 | 120,706,275 | 135,064,169 |
| nsv4436748 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000011.9 | Chr11 | 120,576,984 | 134,934,063 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv15755693 | copy number loss | Multiple | Multiple | See cases | Pathogenic | ClinVar | RCV000790567.1, VCV000638099.1 | 1 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv15755693 | Remapped | Good | NC_000011.10:g.(?_ 120706275)_(135064 169_?)del | GRCh38.p12 | First Pass | NC_000011.10 | Chr11 | 120,706,275 | 135,064,169 |
| nssv15755693 | Submitted genomic | NC_000011.9:g.(?_1 20576984)_(1349340 63_?)del | GRCh37 (hg19) | NC_000011.9 | Chr11 | 120,576,984 | 134,934,063 |
No validation data were submitted for this variant
Clinical Assertions
| Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv15755693 | GRCh37: NC_000011.9:g.(?_120576984)_(134934063_?)del | copy number loss | unknown | See cases | Pathogenic | ClinVar | RCV000790567.1, VCV000638099.1 | 1 |