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dbVar

Database of genomic structural variation

nsv4446200

Organism: Homo sapiens

Study:nstd175 (Genome in a Bottle)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh37 (hg19)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:8,463

Description:SVTYPE=DEL;REPTYPE=SIMPLEDEL
Publication(s):Genome in a Bottle

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 167 SVs from 48 studies. See in: genome view

Remapped(Score: Perfect):77,716,944-77,725,406

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv4446200	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000006.12	Chr6	77,716,944	77,725,406
nsv4446200	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000006.11	Chr6	78,426,661	78,435,123

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv15762204	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv15762204	Remapped	Perfect	NC_000006.12:g.777 16944_77725406del	GRCh38.p12	First Pass	NC_000006.12	Chr6	77,716,944	77,725,406
nssv15762204	Submitted genomic		NC_000006.11:g.784 26661_78435123del	GRCh37 (hg19)		NC_000006.11	Chr6	78,426,661	78,435,123

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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