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dbVar

Database of genomic structural variation

nsv4449033

Organism: Homo sapiens

Study:nstd175 (Genome in a Bottle)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh37 (hg19)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:13,261

Description:SVTYPE=DEL;REPTYPE=SIMPLEDEL
Publication(s):Genome in a Bottle

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 936 SVs from 79 studies. See in: genome view

Remapped(Score: Perfect):78,337,741-78,351,001

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv4449033	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000016.10	Chr16	78,337,741	78,351,001
nsv4449033	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000016.9	Chr16	78,371,638	78,384,898

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv15755836	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv15755836	Remapped	Perfect	NC_000016.10:g.783 37741_78351001del	GRCh38.p12	First Pass	NC_000016.10	Chr16	78,337,741	78,351,001
nssv15755836	Submitted genomic		NC_000016.9:g.7837 1638_78384898del	GRCh37 (hg19)		NC_000016.9	Chr16	78,371,638	78,384,898

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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