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dbVar

Database of genomic structural variation

nsv4449706

Organism: Homo sapiens

Study:nstd177 (Louzada et al. 2020)
Variant Type:copy number variation
Method Type:PCR
Submitted on:GRCh37 (hg19)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:130,670

Publication(s):Louzada et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 891 SVs from 86 studies. See in: genome view

Remapped(Score: Perfect):143,801,866-143,932,535

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nsv4449706	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000004.12	Chr4	143,801,866	143,801,941	143,932,460	143,932,535
nsv4449706	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000004.11	Chr4	144,723,019	144,723,094	144,853,613	144,853,688

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis
nssv15768594	duplication	SAMN00000940	PCR	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nssv15768594	Remapped	Perfect	NC_000004.12:g.(14 3801866_143801941) _(143932460_143932 535)dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	143,801,866	143,801,941	143,932,460	143,932,535
nssv15768594	Submitted genomic		NC_000004.11:g.(14 4723019_144723094) _(144853613_144853 688)dup	GRCh37 (hg19)		NC_000004.11	Chr4	144,723,019	144,723,094	144,853,613	144,853,688

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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