nsv4449708
- Organism: Homo sapiens
- Study:nstd177 (Louzada et al. 2020)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:202,001
- Publication(s):Louzada et al. 2020
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1316 SVs from 93 studies. See in: genome view
Overlapping variant regions from other studies: 1316 SVs from 93 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nsv4449708 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000004.12 | Chr4 | 143,831,586 | 143,833,586 | 144,031,586 | 144,033,586 |
| nsv4449708 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000004.11 | Chr4 | 144,752,739 | 144,754,739 | 144,952,739 | 144,954,739 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis |
|---|---|---|---|---|
| nssv15768587 | deletion | BR1296010301 | Sequencing | Read depth |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nssv15768587 | Remapped | Perfect | NC_000004.12:g.(14 3831586_143833586) _(144031586_144033 586)del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 143,831,586 | 143,833,586 | 144,031,586 | 144,033,586 |
| nssv15768587 | Submitted genomic | NC_000004.11:g.(14 4752739_144754739) _(144952739_144954 739)del | GRCh37 (hg19) | NC_000004.11 | Chr4 | 144,752,739 | 144,754,739 | 144,952,739 | 144,954,739 |