nsv4449722
- Organism: Homo sapiens
- Study:nstd177 (Louzada et al. 2020)
- Variant Type:copy number variation
- Method Type:PCR
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:121,224
- Publication(s):Louzada et al. 2020
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 916 SVs from 85 studies. See in: genome view
Overlapping variant regions from other studies: 916 SVs from 85 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nsv4449722 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000004.12 | Chr4 | 143,858,958 | 143,859,344 | 143,979,792 | 143,980,181 |
| nsv4449722 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000004.11 | Chr4 | 144,780,111 | 144,780,497 | 144,900,945 | 144,901,334 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis |
|---|---|---|---|---|
| nssv15768585 | deletion | SAMN01036710 | PCR | Sequence alignment |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nssv15768585 | Remapped | Perfect | NC_000004.12:g.(14 3858958_143859344) _(143979792_143980 181)del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 143,858,958 | 143,859,344 | 143,979,792 | 143,980,181 |
| nssv15768585 | Submitted genomic | NC_000004.11:g.(14 4780111_144780497) _(144900945_144901 334)del | GRCh37 (hg19) | NC_000004.11 | Chr4 | 144,780,111 | 144,780,497 | 144,900,945 | 144,901,334 |