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dbVar

Database of genomic structural variation

nsv4478749

Organism: Homo sapiens

Study:nstd166 (gnomAD Structural Variants)
Variant Type:mobile element insertion
Method Type:Sequencing
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:1

Publication(s):gnomAD_Structural_Variants

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 38 SVs from 6 studies. See in: genome view

Remapped(Score: Perfect):152,398,123-152,398,123

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv4478749	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000005.10	Chr5	152,398,123	152,398,123
nsv4478749	Submitted genomic		GRCh37.p13	Primary Assembly		NC_000005.9	Chr5	151,777,684	151,777,684

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv16066439	alu insertion	Sequencing	Other

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv16066439	Remapped	Perfect	NC_000005.10:g.152 398123_152398124in s281	GRCh38.p12	First Pass	NC_000005.10	Chr5	152,398,123	152,398,123
nssv16066439	Submitted genomic		NC_000005.9:g.1517 77684_151777685ins 281	GRCh37.p13		NC_000005.9	Chr5	151,777,684	151,777,684

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv16066439	4.6e-005	1	21694

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