nsv4578142
- Organism: Homo sapiens
- Study:nstd166 (gnomAD Structural Variants)
- Variant Type:mobile element insertion
- Method Type:Sequencing
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1
- Publication(s):gnomAD_Structural_Variants
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 232 SVs from 10 studies. See in: genome view
Overlapping variant regions from other studies: 228 SVs from 10 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4578142 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000023.11 | ChrX | 155,723,571 | 155,723,571 |
| nsv4578142 | Submitted genomic | GRCh37.p13 | Primary Assembly | NC_000023.10 | ChrX | 154,953,233 | 154,953,233 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv16089728 | alu insertion | Sequencing | Other |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv16089728 | Remapped | Perfect | NC_000023.11:g.155 723571_155723572in s281 | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 155,723,571 | 155,723,571 |
| nssv16089728 | Submitted genomic | NC_000023.10:g.154 953233_154953234in s281 | GRCh37.p13 | NC_000023.10 | ChrX | 154,953,233 | 154,953,233 |
No validation data were submitted for this variant
No clinical assertion data were submitted for this variant
Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.
Genotype Information
| Variant Call ID | Allele Frequency (AF) | Allele Count (AC) | Allele Number (AN) |
|---|---|---|---|
| nssv16089728 | 4.6e-005 | 1 | 21646 |