nsv461585
- Organism: Homo sapiens
- Study:nstd27 (Itsara et al. 2009)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI35 (hg17)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:366,227
- Publication(s):Itsara et al. 2009
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1312 SVs from 83 studies. See in: genome view
Overlapping variant regions from other studies: 1312 SVs from 83 studies. See in: genome view
Overlapping variant regions from other studies: 102 SVs from 7 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv461585 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000004.12 | Chr4 | 91,474,205 | 91,840,431 |
| nsv461585 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000004.11 | Chr4 | 92,395,356 | 92,761,582 |
| nsv461585 | Submitted genomic | NCBI35 (hg17) | Primary Assembly | NC_000004.9 | Chr4 | 92,752,534 | 93,118,760 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Copy number |
|---|---|---|---|---|
| nssv638867 | copy number gain | SNP array | SNP genotyping analysis | 3 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv638867 | Remapped | Perfect | NC_000004.12:g.(?_ 91474205)_(9184043 1_?)dup | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 91,474,205 | 91,840,431 |
| nssv638867 | Remapped | Perfect | NC_000004.11:g.(?_ 92395356)_(9276158 2_?)dup | GRCh37.p13 | First Pass | NC_000004.11 | Chr4 | 92,395,356 | 92,761,582 |
| nssv638867 | Submitted genomic | NC_000004.9:g.(?_9 2752534)_(93118760 _?)dup | NCBI35 (hg17) | NC_000004.9 | Chr4 | 92,752,534 | 93,118,760 |