nsv464682
- Organism: Homo sapiens
- Study:nstd27 (Itsara et al. 2009)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI35 (hg17)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:260,317
- Publication(s):Itsara et al. 2009
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 2137 SVs from 92 studies. See in: genome view
Overlapping variant regions from other studies: 2137 SVs from 92 studies. See in: genome view
Overlapping variant regions from other studies: 42 SVs from 11 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv464682 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000007.14 | Chr7 | 111,438,856 | 111,699,172 |
| nsv464682 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000007.13 | Chr7 | 111,078,912 | 111,339,228 |
| nsv464682 | Submitted genomic | NCBI35 (hg17) | Primary Assembly | NC_000007.11 | Chr7 | 110,672,863 | 110,933,179 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Copy number |
|---|---|---|---|---|
| nssv641655 | copy number loss | SNP array | SNP genotyping analysis | 1 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv641655 | Remapped | Perfect | NC_000007.14:g.(?_ 111438856)_(111699 172_?)del | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 111,438,856 | 111,699,172 |
| nssv641655 | Remapped | Perfect | NC_000007.13:g.(?_ 111078912)_(111339 228_?)del | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 111,078,912 | 111,339,228 |
| nssv641655 | Submitted genomic | NC_000007.11:g.(?_ 110672863)_(110933 179_?)del | NCBI35 (hg17) | NC_000007.11 | Chr7 | 110,672,863 | 110,933,179 |