nsv465760
- Organism: Homo sapiens
- Study:nstd27 (Itsara et al. 2009)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI35 (hg17)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:261,226
- Publication(s):Itsara et al. 2009
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 932 SVs from 67 studies. See in: genome view
Overlapping variant regions from other studies: 932 SVs from 67 studies. See in: genome view
Overlapping variant regions from other studies: 109 SVs from 3 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv465760 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000008.11 | Chr8 | 107,212,459 | 107,473,684 |
| nsv465760 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000008.10 | Chr8 | 108,224,687 | 108,485,912 |
| nsv465760 | Submitted genomic | NCBI35 (hg17) | Primary Assembly | NC_000008.9 | Chr8 | 108,293,863 | 108,555,088 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Copy number |
|---|---|---|---|---|
| nssv642625 | copy number gain | SNP array | SNP genotyping analysis | 3 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv642625 | Remapped | Perfect | NC_000008.11:g.(?_ 107212459)_(107473 684_?)dup | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 107,212,459 | 107,473,684 |
| nssv642625 | Remapped | Perfect | NC_000008.10:g.(?_ 108224687)_(108485 912_?)dup | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 108,224,687 | 108,485,912 |
| nssv642625 | Submitted genomic | NC_000008.9:g.(?_1 08293863)_(1085550 88_?)dup | NCBI35 (hg17) | NC_000008.9 | Chr8 | 108,293,863 | 108,555,088 |