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dbVar

Database of genomic structural variation

nsv4657600

Organism: Homo sapiens

Study:nstd186 (NCBI Curated Common Structural Variants)
Variant Type:mobile element deletion
Method Type:Curated
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:349

Description:esv3819427 from 1000 Genomes Consortium Phase 3 Integrated SV. For a full list of variants now included in nstd186, refer to the mapping file provided here.

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 174 SVs from 53 studies. See in: genome view

Remapped(Score: Perfect):61,924,915-61,925,263

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv4657600	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000001.11	Chr1	61,924,915	61,925,263
nsv4657600	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000001.10	Chr1	62,390,587	62,390,935

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv16190989	alu deletion	Curated	Curated

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv16190989	Remapped	Perfect	NC_000001.11:g.619 24915_61925263del	GRCh38.p12	First Pass	NC_000001.11	Chr1	61,924,915	61,925,263
nssv16190989	Submitted genomic		NC_000001.10:g.623 90587_62390935del	GRCh37 (hg19)		NC_000001.10	Chr1	62,390,587	62,390,935

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv16190989	0.752	3767	5008

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