nsv4658006
- Organism: Homo sapiens
- Study:nstd185 (Puig et al. 2020)
- Variant Type:inversion
- Method Type:ddPCR
- Submitted on:GRCh38 (hg38)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:67,257
- Publication(s):Puig et al. 2020
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 622 SVs from 45 studies. See in: genome view
Overlapping variant regions from other studies: 618 SVs from 45 studies. See in: genome view
Overlapping variant regions from other studies: 107 SVs from 24 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4658006 | Submitted genomic | GRCh38.p13 | Primary Assembly | NC_000023.11 | ChrX | 155,386,727 | 155,453,983 | ||
| nsv4658006 | Remapped | Good | GRCh37.p13 | Primary Assembly | Second Pass | NC_000023.10 | ChrX | 154,616,376 | 154,683,644 |
| nsv4658006 | Remapped | Perfect | GRCh37.p13 | PATCHES | First Pass | NW_003871103.3 | ChrX|NW_00 3871103.3 | 2,820,706 | 2,887,962 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv16181400 | inversion | ddPCR | Other |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv16181400 | Submitted genomic | NC_000023.11:g.(?_ 155386727)_(155453 983_?)inv | GRCh38.p13 | NC_000023.11 | ChrX | 155,386,727 | 155,453,983 | ||
| nssv16181400 | Remapped | Perfect | NW_003871103.3:g.( ?_2820706)_(288796 2_?)inv | GRCh37.p13 | First Pass | NW_003871103.3 | ChrX|NW_00 3871103.3 | 2,820,706 | 2,887,962 |
| nssv16181400 | Remapped | Good | NC_000023.10:g.(?_ 154616376)_(154683 644_?)inv | GRCh37.p13 | Second Pass | NC_000023.10 | ChrX | 154,616,376 | 154,683,644 |