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dbVar

Database of genomic structural variation

nsv4671070

Organism: Homo sapiens

Study:nstd186 (NCBI Curated Common Structural Variants)
Variant Type:copy number variation
Method Type:Curated
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:51,261

Description:esv3874416 from 1000 Genomes Consortium Phase 3 Integrated SV. For a full list of variants now included in nstd186, refer to the mapping file provided here.

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 696 SVs from 66 studies. See in: genome view

Remapped(Score: Perfect):23,374,637-23,425,897

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv4671070	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000015.10	Chr15	23,374,637	23,425,897
nsv4671070	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000015.9	Chr15	23,619,784	23,671,044

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv16198939	copy number loss	Curated	Curated

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv16198939	Remapped	Perfect	NC_000015.10:g.233 74637_23425897del	GRCh38.p12	First Pass	NC_000015.10	Chr15	23,374,637	23,425,897
nssv16198939	Submitted genomic		NC_000015.9:g.2361 9784_23671044del	GRCh37 (hg19)		NC_000015.9	Chr15	23,619,784	23,671,044

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv16198939	0.018	92	5008

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