nsv4675255
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:copy number variation
- Method Type:Multiple
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:2,361,161
- Description:GRCh37/hg19 13q12.11(chr13:20668070-23029230)x1 AND not provided
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 7761 SVs from 103 studies. See in: genome view
Overlapping variant regions from other studies: 7761 SVs from 103 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
nsv4675255 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000013.11 | Chr13 | 20,093,931 | 22,455,091 |
nsv4675255 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000013.10 | Chr13 | 20,668,070 | 23,029,230 |
Variant Call Information
Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
---|---|---|---|---|---|---|---|---|
nssv16208360 | copy number loss | Multiple | Multiple | not provided | Pathogenic | ClinVar | RCV001006546.1, VCV000815569.1 | 1 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
nssv16208360 | Remapped | Perfect | NC_000013.11:g.(?_ 20093931)_(2245509 1_?)del | GRCh38.p12 | First Pass | NC_000013.11 | Chr13 | 20,093,931 | 22,455,091 |
nssv16208360 | Submitted genomic | NC_000013.10:g.(?_ 20668070)_(2302923 0_?)del | GRCh37 (hg19) | NC_000013.10 | Chr13 | 20,668,070 | 23,029,230 |
No validation data were submitted for this variant
Clinical Assertions
Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
---|---|---|---|---|---|---|---|---|
nssv16208360 | GRCh37: NC_000013.10:g.(?_20668070)_(23029230_?)del | copy number loss | germline | not provided | Pathogenic | ClinVar | RCV001006546.1, VCV000815569.1 | 1 |