nsv4676223
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:copy number variation
- Method Type:Multiple
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:778,810
- Description:GRCh37/hg19 19q13.13-13.2(chr19:38512717-39291526)x3 AND not provided
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 2507 SVs from 84 studies. See in: genome view
Overlapping variant regions from other studies: 2507 SVs from 84 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4676223 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000019.10 | Chr19 | 38,022,077 | 38,800,886 |
| nsv4676223 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000019.9 | Chr19 | 38,512,717 | 39,291,526 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv16207397 | copy number gain | Multiple | Multiple | not provided | Uncertain significance | ClinVar | RCV001007047.1, VCV000816081.1 | 3 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv16207397 | Remapped | Perfect | NC_000019.10:g.(?_ 38022077)_(3880088 6_?)dup | GRCh38.p12 | First Pass | NC_000019.10 | Chr19 | 38,022,077 | 38,800,886 |
| nssv16207397 | Submitted genomic | NC_000019.9:g.(?_3 8512717)_(39291526 _?)dup | GRCh37 (hg19) | NC_000019.9 | Chr19 | 38,512,717 | 39,291,526 |
No validation data were submitted for this variant
Clinical Assertions
| Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv16207397 | GRCh37: NC_000019.9:g.(?_38512717)_(39291526_?)dup | copy number gain | germline | not provided | Uncertain significance | ClinVar | RCV001007047.1, VCV000816081.1 | 3 |